RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NTF4P34130 210 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 OR4A5Q8NH83 315 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 RBM14Q96PK6 669 aaKnown RBP13.62□□□□□ -0.23
SCAF1-201ENST00000360565 C1QTNF9P0C862 333 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 FCGR2BP31994 310 aaPredicted RBP13.62□□□□□ -0.23
SCAF1-201ENST00000360565 PNKDQ8N490 385 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 MDS2Q8NDY4 140 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 C17orf100A8MU93 164 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 M0QZK8 103 aa13.62□□□□□ -0.23
SCAF1-201ENST00000360565 GGCTO75223 188 aaKnown RBP13.62□□□□□ -0.23
SCAF1-201ENST00000360565 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
SCAF1-201ENST00000360565 SRRM5B3KS81 715 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 COLCA1Q6ZS62 124 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 LINC00305Q7Z4B0 112 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 ANAPC10Q9UM13 185 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 ZNF788Q6ZQV5 615 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 FAM57AQ8TBR7 257 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 PGLYRP4Q96LB8 373 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 SPG11Q96JI7 2443 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.61□□□□□ -0.23
SCAF1-201ENST00000360565 IGKV1-6A0A0C4DH72 117 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 CXCL1P09341 107 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 CSRP1P21291 193 aaKnown RBP13.61□□□□□ -0.23
SCAF1-201ENST00000360565 LINC00205P59089 165 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 Q6P435 159 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 GRAMD2BQ96HH9 432 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 SLX1AQ9BQ83 275 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 ELOVL1Q9BW60 279 aa13.61□□□□□ -0.23
SCAF1-201ENST00000360565 TMEM144Q7Z5S9 345 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 LINC00312Q9Y6C7 94 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 ZGRF1Q86YA3 2104 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 M0QZ24 198 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCAF1-201ENST00000360565 SAA1P0DJI8 122 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-201ENST00000360565 RNFT1Q5M7Z0 435 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 OR8A1Q8NGG7 326 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 EAF1Q96JC9 268 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-201ENST00000360565 CBLN4Q9NTU7 201 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 ELOVL5Q9NYP7 299 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 IGHV3-35A0A0C4DH35 117 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 C15orf61A6NNL5 157 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 B9A039 149 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 CA7P43166 264 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 Q6ZS49 121 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 FBXL15Q9H469 300 aa13.6□□□□□ -0.23
SCAF1-201ENST00000360565 NUP210Q8TEM1 1887 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-201ENST00000360565 AMY1AP04745 511 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 UCNP55089 124 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 HOXA4Q00056 320 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-201ENST00000360565 TRBV6-6A0A0A6YYG2 114 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 CEACAM1P13688 526 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
SCAF1-201ENST00000360565 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 IL36BQ9NZH7 164 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 TRAV1-1A0A0B4J248 108 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 C5orf52A6NGY3 159 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 F5H697 171 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 UBE2CO00762 179 aa13.59□□□□□ -0.23
SCAF1-201ENST00000360565 SRSF6Q13247 344 aaKnown RBP13.59□□□□□ -0.23
SCAF1-201ENST00000360565 LOC389332A0A1B0GUA5 103 aa13.58□□□□□ -0.23
SCAF1-201ENST00000360565 UPK2O00526 184 aa13.58□□□□□ -0.23
SCAF1-201ENST00000360565 APOBEC3AP31941 199 aaPredicted RBP13.58□□□□□ -0.23
SCAF1-201ENST00000360565 GPX4P36969 197 aaPredicted RBP13.58□□□□□ -0.23
SCAF1-201ENST00000360565 COMPP49747 757 aaPredicted RBP13.58□□□□□ -0.23
SCAF1-201ENST00000360565 MEF2CQ06413 473 aaPredicted RBP13.58□□□□□ -0.23
SCAF1-201ENST00000360565 RPLP1P05386 114 aaKnown RBP13.58□□□□□ -0.24
SCAF1-201ENST00000360565 LIPFP07098 398 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 TMEM14EPQ6UXP3 125 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 MAS1LP35410 378 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 C19orf35Q6ZS72 473 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 SRSF12Q8WXF0 261 aaKnown RBP13.58□□□□□ -0.24
SCAF1-201ENST00000360565 HSPB8Q9UJY1 196 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 CD99P14209 185 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 COQ2Q96H96 371 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 PLSCR4Q9NRQ2 329 aa13.58□□□□□ -0.24
SCAF1-201ENST00000360565 KIF26AQ9ULI4 1882 aaPredicted RBP13.57□□□□□ -0.24
SCAF1-201ENST00000360565 RELBQ01201 579 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 CACNG8Q8WXS5 425 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 GOLT1BQ9Y3E0 138 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 KIAA1671Q9BY89 1806 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 MLNRO43193 412 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 FOLR2P14207 255 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 MFAP4P55083 255 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 FOXA3P55318 350 aaPredicted RBP13.57□□□□□ -0.24
SCAF1-201ENST00000360565 CD177Q8N6Q3 437 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 OR4B1Q8NGF8 309 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 MALRD1Q5VYJ5 2156 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 TMEM50AO95807 157 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 PPOXP50336 477 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 TREML4Q6UXN2 200 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 TCF23Q7RTU1 214 aa13.57□□□□□ -0.24
SCAF1-201ENST00000360565 LINC00473A8K010 186 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 IL4P05112 153 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 GFI1BQ5VTD9 330 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 S4R3C0 116 aa13.56□□□□□ -0.24
SCAF1-201ENST00000360565 TMEM189A5PLL7 270 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms