RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 C4orf17Q53FE4 359 aa14.27□□□□□ -0.13
NPAS3-202ENST00000356141 FBLN7Q53RD9 439 aa14.27□□□□□ -0.13
NPAS3-202ENST00000356141 ZNF709Q8N972 641 aa14.27□□□□□ -0.13
NPAS3-202ENST00000356141 HIST1H2BAQ96A08 127 aa14.27□□□□□ -0.13
NPAS3-202ENST00000356141 NBPF19A0A087WUL8 3843 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 PIGBOS1A0A0B4J2F0 54 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 AP4M1O00189 453 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 FOLR2P14207 255 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 S100A2P29034 98 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 SLC24A4Q8NFF2 622 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 OR10G4Q8NGN3 311 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 OR10G9Q8NGN4 311 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 OR10G7Q8NGN6 311 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 OR9G1Q8NH87 305 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 CIB3Q96Q77 187 aaPredicted RBP14.26□□□□□ -0.13
NPAS3-202ENST00000356141 PLEKHA3Q9HB20 300 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 SLC39A9Q9NUM3 307 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 PTPN13Q12923 2485 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.26□□□□□ -0.13
NPAS3-202ENST00000356141 MAP1LC3B2A6NCE7 125 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 ACTL6BO94805 426 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 NPY1RP25929 384 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 RAB5CP51148 216 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 HSPE1P61604 102 aaKnown RBP14.26□□□□□ -0.13
NPAS3-202ENST00000356141 TLE4Q04727 773 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 GAMTQ14353 236 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 C11orf71Q6IPW1 123 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 TCTEX1D1Q8N7M0 179 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 LYPD6BQ8NI32 183 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 MAP1LC3BQ9GZQ8 125 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 KAAG1Q9UBP8 84 aa14.26□□□□□ -0.13
NPAS3-202ENST00000356141 RBFOX2O43251 390 aaKnown RBP eCLIP14.25□□□□□ -0.13
NPAS3-202ENST00000356141 IGHV2-5P01817 119 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 ARG1P05089 322 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 PCGF1Q9BSM1 259 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 LINC00574Q9H8X3 128 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 IGHV3OR16-10A0A075B7F0 116 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 hCG_1809904A0A1W2PP81 198 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 A0A1W2PR64 198 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 A0A1W2PRV1 198 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 ZFP36P26651 326 aaKnown RBP14.25□□□□□ -0.13
NPAS3-202ENST00000356141 PPOXP50336 477 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 RAB11AP62491 216 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 ARSJQ5FYB0 599 aaPredicted RBP14.25□□□□□ -0.13
NPAS3-202ENST00000356141 OR10A7Q8NGE5 316 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 RAB1CQ92928 201 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 TIMD4Q96H15 378 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 SEC11CQ9BY50 192 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 COMMD5Q9GZQ3 224 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 SMCO4Q9NRQ5 59 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 TMEM14BQ9NUH8 114 aa14.25□□□□□ -0.13
NPAS3-202ENST00000356141 TSTD3H0UI37 97 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 UPK2O00526 184 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 KBTBD11O94819 623 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 KIR2DS2P43631 304 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 TREML4Q6UXN2 200 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 NEIL1Q96FI4 390 aaPredicted RBP14.24□□□□□ -0.13
NPAS3-202ENST00000356141 ZNF430Q9H8G1 570 aaPredicted RBP14.24□□□□□ -0.13
NPAS3-202ENST00000356141 INSIG2Q9Y5U4 225 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 ZNF25P17030 456 aaPredicted RBP14.24□□□□□ -0.13
NPAS3-202ENST00000356141 AGAP20933 346 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 AWAT1Q58HT5 328 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.24□□□□□ -0.13
NPAS3-202ENST00000356141 ACY3Q96HD9 319 aa14.24□□□□□ -0.13
NPAS3-202ENST00000356141 GPR6P46095 362 aaPredicted RBP14.23□□□□□ -0.13
NPAS3-202ENST00000356141 ICAM4Q14773 271 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 OR5T1Q8NG75 326 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 ADTRPQ96IZ2 230 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 CARHSP1Q9Y2V2 147 aaKnown RBP14.23□□□□□ -0.13
NPAS3-202ENST00000356141 IGFBP2P18065 325 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 OR2T6Q8NHC8 308 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 MGST2Q99735 147 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 PBDC1Q9BVG4 233 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 BPESC1Q9GZL8 116 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 KMT2BQ9UMN6 2715 aaPredicted RBP14.23□□□□□ -0.13
NPAS3-202ENST00000356141 ZNF727A8MUV8 499 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 SSBP2P81877 361 aaPredicted RBP14.23□□□□□ -0.13
NPAS3-202ENST00000356141 TMEM41BQ5BJD5 291 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 SPATA31B1PQ5VZV4 182 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 RPEQ96AT9 228 aa14.23□□□□□ -0.13
NPAS3-202ENST00000356141 SSBP3Q9BWW4 388 aaPredicted RBP14.23□□□□□ -0.13
NPAS3-202ENST00000356141 GCN1Q92616 2671 aaKnown RBP14.22□□□□□ -0.13
NPAS3-202ENST00000356141 PRB4P10163 310 aaPredicted RBP14.22□□□□□ -0.13
NPAS3-202ENST00000356141 RPL8P62917 257 aaKnown RBP14.22□□□□□ -0.13
NPAS3-202ENST00000356141 TNXAQ16473 311 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 SOHLH1Q5JUK2 328 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 Q8N7P7 452 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 OR5AN1Q8NGI8 311 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 OR10D4PQ8NGN7 298 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 CLDND2Q8NHS1 167 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 ST6GALNAC6Q969X2 333 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 FAM103A1Q9BTL3 118 aaKnown RBP14.22□□□□□ -0.13
NPAS3-202ENST00000356141 SLC35B3Q9H1N7 401 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 FBXL15Q9H469 300 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 AURKAIP1Q9NWT8 199 aaPredicted RBP14.22□□□□□ -0.13
NPAS3-202ENST00000356141 TENM4Q6N022 2769 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 CSPG4Q6UVK1 2322 aa14.22□□□□□ -0.13
NPAS3-202ENST00000356141 A0A1B0GW64 132 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms