RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 DCTN2Q13561 401 aaKnown RBP14.74□□□□□ -0.05
SYNE4-202ENST00000340477 KLK9Q2XQG4 91 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 TMEM268Q5VZI3 342 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 ACSM6Q6P461 480 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 TMED4Q7Z7H5 227 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 GLYATL2Q8WU03 294 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 ENY2Q9NPA8 101 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 PEMTQ9UBM1 199 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 KLK9Q9UKQ9 250 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 DBX1A6NMT0 343 aa14.73□□□□□ -0.05
SYNE4-202ENST00000340477 GGCTO75223 188 aaKnown RBP14.73□□□□□ -0.05
SYNE4-202ENST00000340477 ARL3P36405 182 aa14.73□□□□□ -0.05
SYNE4-202ENST00000340477 SYNJ2BPP57105 145 aa14.73□□□□□ -0.05
SYNE4-202ENST00000340477 KRTAP10-11P60412 298 aa14.73□□□□□ -0.05
SYNE4-202ENST00000340477 GALNT14Q96FL9 552 aa14.73□□□□□ -0.05
SYNE4-202ENST00000340477 BMPR1BO00238 502 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 IGHV3-23P01764 117 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 HOXA1P49639 335 aaPredicted RBP14.72□□□□□ -0.05
SYNE4-202ENST00000340477 KLF5Q13887 457 aaPredicted RBP14.72□□□□□ -0.05
SYNE4-202ENST00000340477 RBMS2Q15434 407 aaKnown RBP14.72□□□□□ -0.05
SYNE4-202ENST00000340477 IZUMO4Q1ZYL8 232 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 CLEC19AQ6UXS0 136 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 SELENOHQ8IZQ5 122 aaKnown RBP14.72□□□□□ -0.05
SYNE4-202ENST00000340477 OR9G4Q8NGQ1 327 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 OR1P1Q8NH06 330 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 VN1R17PQ8TDU5 208 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 IL22RA2Q969J5 263 aa14.72□□□□□ -0.05
SYNE4-202ENST00000340477 MFSD2BA6NFX1 497 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 PPP5D1E7EU14 171 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 ST8SIA3O43173 380 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 LY86O95711 162 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 P0C879 139 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 SNCAP37840 140 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 BAK1Q16611 211 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 TMEM230Q96A57 120 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 C7orf50Q9BRJ6 194 aaKnown RBP14.71□□□□□ -0.05
SYNE4-202ENST00000340477 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.71□□□□□ -0.05
SYNE4-202ENST00000340477 CACFD1Q9UGQ2 172 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 S4R3C0 116 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 TMEM56-RWDD3S4R434 201 aa14.71□□□□□ -0.05
SYNE4-202ENST00000340477 A0A0B4J293 547 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 VAMP1P23763 118 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 TMEM128Q5BJH2 165 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 LGI3Q8N145 548 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 CENPSQ8N2Z9 138 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 OR2C3Q8N628 320 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 LHFPL5Q8TAF8 219 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 CCDC140Q96MF4 163 aa14.7□□□□□ -0.06
SYNE4-202ENST00000340477 ZNF256Q9Y2P7 627 aaPredicted RBP14.7□□□□□ -0.06
SYNE4-202ENST00000340477 LINC00854A0A1B0GVQ3 168 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 IL7P13232 177 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 GPR183P32249 361 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 SUB1P53999 127 aaKnown RBP eCLIP14.69□□□□□ -0.06
SYNE4-202ENST00000340477 TMEM187Q14656 261 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 FAM106AQ4KMX7 169 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 SPINK9Q5DT21 86 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 LINC00299Q6ZSB3 139 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 ZNF114Q8NC26 417 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 ZNF502Q8TBZ5 544 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 MISP3Q96FF7 219 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 CACNG5Q9UF02 275 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 DNAH3Q8TD57 4116 aa14.69□□□□□ -0.06
SYNE4-202ENST00000340477 CNPY1Q3B7I2 92 aa14.68□□□□□ -0.06
SYNE4-202ENST00000340477 DEFB121Q5J5C9 76 aa14.68□□□□□ -0.06
SYNE4-202ENST00000340477 PLET1Q6UQ28 207 aa14.68□□□□□ -0.06
SYNE4-202ENST00000340477 S100ZQ8WXG8 99 aa14.68□□□□□ -0.06
SYNE4-202ENST00000340477 GAR1Q9NY12 217 aaKnown RBP14.68□□□□□ -0.06
SYNE4-202ENST00000340477 C21orf62Q9NYP8 219 aa14.68□□□□□ -0.06
SYNE4-202ENST00000340477 DMRT1Q9Y5R6 373 aa14.68□□□□□ -0.06
SYNE4-202ENST00000340477 A0A0B4J2A0 478 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 A0A0G2JRQ6 117 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 WI2-2373I1.2A0A1W2PRP0 233 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 A6NHS1 94 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 K7EIL1 84 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 OR2C1O95371 312 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 CLEC3BP05452 202 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 SULT1A3P0DMM9 295 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 SULT1A4P0DMN0 295 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 CCR6P51684 374 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 SPCS3P61009 180 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 UBE2MP61081 183 aaKnown RBP14.67□□□□□ -0.06
SYNE4-202ENST00000340477 SUPT4H1P63272 117 aaKnown RBP14.67□□□□□ -0.06
SYNE4-202ENST00000340477 Q56UQ5 140 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 OR52E5Q8NH55 327 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 ATP6V0BQ99437 205 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 SHPKQ9UHJ6 478 aa14.67□□□□□ -0.06
SYNE4-202ENST00000340477 DUXBA0A1W2PPF3 345 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 INS-IGF2F8WCM5 200 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 CORTO00230 105 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 HLA-AP01891 365 aaKnown RBP14.66□□□□□ -0.06
SYNE4-202ENST00000340477 GPHB5Q86YW7 130 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 UBAC2Q8NBM4 344 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 GPR146Q96CH1 333 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 BSCL2Q96G97 398 aaPredicted RBP14.66□□□□□ -0.06
SYNE4-202ENST00000340477 PRR25Q96S07 402 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 SDHCQ99643 169 aaPredicted RBP14.66□□□□□ -0.06
SYNE4-202ENST00000340477 CCDC32Q9BV29 185 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 BATF3Q9NR55 127 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 PRR13Q9NZ81 148 aa14.66□□□□□ -0.06
SYNE4-202ENST00000340477 IGHV3-21A0A0B4J1V1 117 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms