RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 DKK4Q9UBT3 224 aa14.26□□□□□ -0.13
PTP4A3-201ENST00000329397 TACC2O95359 2948 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 OTOGLQ3ZCN5 2332 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 IGKV1-16P04430 117 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 OR10J4P0C629 311 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 FXYD3Q14802 87 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 MBNL2Q5VZF2 373 aaKnown RBP14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 BHLHA15Q7RTS1 189 aaPredicted RBP14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 CMTM2Q8TAZ6 248 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 NAGKQ9UJ70 344 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 CBY3A6NI87 242 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 TCL1AP56279 114 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 OR4S2Q8NH73 311 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 RND1Q92730 232 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 TBX15Q96SF7 602 aa14.25□□□□□ -0.13
PTP4A3-201ENST00000329397 SERF1AO75920 110 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 CRYBB3P26998 211 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 CCKARP32238 428 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 CDKN1AP38936 164 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 PSG5Q15238 335 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 RNF151Q2KHN1 245 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 Q6ZWC4 215 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 SMIM15Q7Z3B0 74 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 MRPL18Q9H0U6 180 aaKnown RBP14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 IDI2-AS1Q9NZ38 188 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 IGKV1OR2-108A0A075B7D4 117 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 PRR33A8MZF0 331 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 ERVFC1-1P60608 527 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 ODF1Q14990 250 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 KIAA1644Q3SXP7 199 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 TRAT1Q6PIZ9 186 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 TOMM20LQ6UXN7 152 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 SEM1Q6ZVN7 128 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 OR8I2Q8N0Y5 310 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 PROCRQ9UNN8 238 aa14.24□□□□□ -0.13
PTP4A3-201ENST00000329397 RIF1Q5UIP0 2472 aaKnown RBP14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 FAM216BQ8N7L0 139 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 OR1L6Q8NGR2 347 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 AKAP13Q12802 2813 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 F2RL2O00254 374 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 RPL29P47914 159 aaKnown RBP14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 TMPRSS3P57727 454 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 RHOBP62745 196 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 OR52E5Q8NH55 327 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 EAF1Q96JC9 268 aaPredicted RBP14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 ENY2Q9NPA8 101 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 CSMD1Q96PZ7 3565 aa14.23□□□□□ -0.13
PTP4A3-201ENST00000329397 A0A1W2PN81 502 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 FCN1O00602 326 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 IGHV3-48P01763 117 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 NHLRC2Q8NBF2 726 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 RNF114Q9Y508 228 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 OR51B2Q9Y5P1 312 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 SLC25A15Q9Y619 301 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 SRRM4A7MD48 611 aaKnown RBP14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 SNURFLB1AK76 121 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 TDGF1P3P51864 188 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 HSPE1P61604 102 aaKnown RBP14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 TMEM249Q2WGJ8 235 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 CENPWQ5EE01 88 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 PQLC2Q6ZP29 291 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 C22orf34Q6ZV56 151 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 OR10W1Q8NGF6 305 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 CCL13Q99616 98 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 GCM1Q9NP62 436 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 PLSCR4Q9NRQ2 329 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 OR7C2O60412 319 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 C1orf162Q8NEQ5 155 aaPredicted RBP14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 PPP1R35Q8TAP8 253 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 ZCCHC14Q8WYQ9 949 aaKnown RBP14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 HSPB9Q9BQS6 159 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 FAM103A1Q9BTL3 118 aaKnown RBP14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 TMEM14BQ9NUH8 114 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 IL36BQ9NZH7 164 aa14.22□□□□□ -0.13
PTP4A3-201ENST00000329397 DYSFO75923 2080 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 SPAARA0A1B0GVQ0 90 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 LINC00869P0C866 280 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 CRISP2P16562 243 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 PRR31Q5SQ13 230 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 MMD2Q8IY49 270 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 ST6GALNAC3Q8NDV1 305 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 BEND2Q8NDZ0 799 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 OR9G1Q8NH87 305 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 SARAFQ96BY9 339 aa14.21□□□□□ -0.13
PTP4A3-201ENST00000329397 SERTM2A0A1B0GWG4 89 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 FAM90A9PA6NNJ1 464 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 M0R296 226 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 CA1P00915 261 aaPredicted RBP14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 DEFB109BQ30KR1 87 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 NABP2Q9BQ15 211 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 CLEC5AQ9NY25 188 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 PAM16Q9Y3D7 125 aa14.21□□□□□ -0.14
PTP4A3-201ENST00000329397 J3KRW8 73 aa14.2□□□□□ -0.14
PTP4A3-201ENST00000329397 J3QR06 171 aa14.2□□□□□ -0.14
PTP4A3-201ENST00000329397 YPEL3P61236 119 aaPredicted RBP14.2□□□□□ -0.14
PTP4A3-201ENST00000329397 MORN5Q5VZ52 161 aa14.2□□□□□ -0.14
PTP4A3-201ENST00000329397 ZNF705AQ6ZN79 300 aaPredicted RBP14.2□□□□□ -0.14
PTP4A3-201ENST00000329397 BAGE3Q86Y29 109 aa14.2□□□□□ -0.14
PTP4A3-201ENST00000329397 BAGE2Q86Y30 109 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms