RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 REG1AP05451 166 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 CSRP1P21291 193 aaKnown RBP13.76□□□□□ -0.21
SFXN1-201ENST00000321442 LINC00205P59089 165 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 ZNF324BQ6AW86 544 aaPredicted RBP13.76□□□□□ -0.21
SFXN1-201ENST00000321442 NEU1Q99519 415 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 PCNX3Q9H6A9 2034 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 J3QR89 54 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 IGHV2-5P01817 119 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 GZMBP10144 247 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 FAM27E3Q08E93 113 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 PMCHL1Q16048 86 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 TMEM108Q6UXF1 575 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 ZNF785A8K8V0 405 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 SNAI2O43623 268 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
SFXN1-201ENST00000321442 A0A1B0GUS0 222 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 PTGDSP41222 190 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 PERPQ96FX8 193 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 LTBP2Q14767 1821 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 IGLV3-32A0A0A0MS00 114 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 CORTO00230 105 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 GPR6P46095 362 aaPredicted RBP13.75□□□□□ -0.21
SFXN1-201ENST00000321442 NRN1Q9NPD7 142 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 WDFY4Q6ZS81 3184 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 MIR17HGQ75NE6 70 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 TMEM242Q9NWH2 141 aa13.75□□□□□ -0.21
SFXN1-201ENST00000321442 NMUP48645 174 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 TMEM177Q53S58 311 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 RAB37Q96AX2 223 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 AMY1AP04745 511 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 RPL8P62917 257 aaKnown RBP13.74□□□□□ -0.21
SFXN1-201ENST00000321442 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 OBSL1O75147 1896 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 VPS13AQ96RL7 3174 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 K7ERU9 68 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 SLC25A17O43808 307 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 CA1P00915 261 aaPredicted RBP13.74□□□□□ -0.21
SFXN1-201ENST00000321442 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 RAXQ9Y2V3 346 aa13.74□□□□□ -0.21
SFXN1-201ENST00000321442 COMPP49747 757 aaPredicted RBP13.73□□□□□ -0.21
SFXN1-201ENST00000321442 MMDQ15546 238 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 SLC35E4Q6ICL7 350 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 ZCCHC24Q8N2G6 241 aaKnown RBP13.73□□□□□ -0.21
SFXN1-201ENST00000321442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.73□□□□□ -0.21
SFXN1-201ENST00000321442 A0A1B0GW64 132 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 LILRA1O75019 489 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 C20orf204Q6ZNR8 217 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 RBM14Q96PK6 669 aaKnown RBP13.73□□□□□ -0.21
SFXN1-201ENST00000321442 INSIG2Q9Y5U4 225 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 TRAV1-1A0A0B4J248 108 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 PRR33A8MZF0 331 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 HYPMO75409 117 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 S100A7P31151 101 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 GTF3AQ92664 365 aaKnown RBP13.73□□□□□ -0.21
SFXN1-201ENST00000321442 RASL11BQ9BPW5 248 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 MYO9AB2RTY4 2548 aa13.73□□□□□ -0.21
SFXN1-201ENST00000321442 ORM1P02763 201 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
SFXN1-201ENST00000321442 RIGQ13278 110 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 STXBP6Q8NFX7 210 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-201ENST00000321442 RPL30P62888 115 aaKnown RBP13.72□□□□□ -0.21
SFXN1-201ENST00000321442 PEAR1Q5VY43 1037 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-201ENST00000321442 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 LINC01551Q86U37 167 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 LINC00470Q9BZP3 86 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 HSPB8Q9UJY1 196 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 ARFGEF3Q5TH69 2177 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 C16orf97H3BN30 126 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 EREGO14944 169 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 KCNS1Q96KK3 526 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 LPAR2Q9HBW0 351 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 TNFRSF19Q9NS68 423 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 NUTF2P61970 127 aaKnown RBP13.72□□□□□ -0.21
SFXN1-201ENST00000321442 TEX38Q6PEX7 206 aa13.72□□□□□ -0.21
SFXN1-201ENST00000321442 SLC25A10Q9UBX3 287 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-201ENST00000321442 ALPK3Q96L96 1907 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 NUDT3O95989 172 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 SSBP4Q9BWG4 385 aaPredicted RBP13.71□□□□□ -0.21
SFXN1-201ENST00000321442 CLEC5AQ9NY25 188 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 GAGE10A6NGK3 116 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 GNG7O60262 68 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 MOSP00540 346 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 ACP7Q6ZNF0 438 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 PMCHL2Q9BQD1 86 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 LAMTOR2Q9Y2Q5 125 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 SELENOKQ9Y6D0 94 aa13.71□□□□□ -0.21
SFXN1-201ENST00000321442 TIMD4Q96H15 378 aa13.71□□□□□ -0.22
SFXN1-201ENST00000321442 JPT1Q9UK76 154 aa13.71□□□□□ -0.22
SFXN1-201ENST00000321442 MALRD1Q5VYJ5 2156 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 PSPNO60542 156 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 LHX2P50458 406 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 IL15RAQ13261 267 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 J3KRW8 73 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms