RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-202ENST00000311550 FANCMQ8IYD8 2048 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 TRBV9A0A0B4J1U6 114 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 NBEAP1P0C6P0 100 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 FAM106CPP0CH98 169 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 TMEM42Q69YG0 159 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 WNT10AQ9GZT5 417 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
GABRB3-202ENST00000311550 MYOZ3Q8TDC0 251 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 LOXL3P58215 753 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 TMEM78Q5T7P6 136 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 TMEM208Q9BTX3 173 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 IGHV1-18A0A0C4DH31 117 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 YPEL1O60688 119 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 IL18BPO95998 194 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 IGKV1-5P01602 117 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 DUTP33316 252 aaKnown RBP14.37□□□□□ -0.11
GABRB3-202ENST00000311550 B3GALT5-AS1P59052 145 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 YPEL2Q96QA6 119 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 ZFP30Q9Y2G7 519 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 SELLP14151 372 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 GFI1BQ5VTD9 330 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 RNASE7Q9H1E1 156 aaKnown RBP14.37□□□□□ -0.11
GABRB3-202ENST00000311550 IGHV3OR16-13A0A075B7E8 117 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 IGHV3-74A0A0B4J1X5 117 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 UBE2CO00762 179 aa14.37□□□□□ -0.11
GABRB3-202ENST00000311550 TM4SF5O14894 197 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 BTF3P20290 206 aaKnown RBP14.36□□□□□ -0.11
GABRB3-202ENST00000311550 SIAH2O43255 324 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 GPX4P36969 197 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-202ENST00000311550 CA7P43166 264 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 ATP5IP56385 69 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-202ENST00000311550 SLC25A33Q9BSK2 321 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 A6NDN8 102 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 IGHV3-23P01764 117 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 CSRP2Q16527 193 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 ZCCHC14Q8WYQ9 949 aaKnown RBP14.36□□□□□ -0.11
GABRB3-202ENST00000311550 CDC42EP3Q9UKI2 254 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 TBL2Q9Y4P3 447 aaKnown RBP14.36□□□□□ -0.11
GABRB3-202ENST00000311550 LIPFP07098 398 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 FOLR2P14207 255 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 C16orf92Q96LL3 132 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 HS3ST6Q96QI5 342 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 ACACAQ13085 2346 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 PEX7O00628 323 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 MBD3L1Q8WWY6 194 aa14.36□□□□□ -0.11
GABRB3-202ENST00000311550 C15orf61A6NNL5 157 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 LOC105371242A0A075B767 164 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 TFPI2P48307 235 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 CTAG1AP78358 180 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 FAM19A2Q8N3H0 131 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 BMPERQ8N8U9 685 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 ZNF738Q8NE65 137 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 ABHD17AQ96GS6 310 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 ELOVL5Q9NYP7 299 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 DOCK7Q96N67 2140 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 ATG101Q9BSB4 218 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 AUP1Q9Y679 476 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 EP400Q96L91 3159 aa14.35□□□□□ -0.11
GABRB3-202ENST00000311550 B9A039 149 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 CFPP27918 469 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 HBBP68871 147 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 FAM90A1Q86YD7 464 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 METRNQ9UJH8 293 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 C5orf52A6NGY3 159 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 CD59P13987 128 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 RBPMS2Q6ZRY4 209 aaKnown RBP14.34□□□□□ -0.11
GABRB3-202ENST00000311550 A0A0G2JRQ6 117 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 DPRXA6NFQ7 191 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 UPK2O00526 184 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 COMPP49747 757 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-202ENST00000311550 TMEM144Q7Z5S9 345 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 DPF1Q92782 380 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 LINC00312Q9Y6C7 94 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 LINC00205P59089 165 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 WDR83OSQ9Y284 106 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 APOBEC3AP31941 199 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-202ENST00000311550 C20orf204Q6ZNR8 217 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 DNM1P46Q6ZS02 220 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 C1QL4Q86Z23 238 aa14.34□□□□□ -0.11
GABRB3-202ENST00000311550 RPP25LQ8N5L8 163 aaKnown RBP14.34□□□□□ -0.11
GABRB3-202ENST00000311550 IGHV3OR16-8A0A075B7F1 116 aa14.33□□□□□ -0.11
GABRB3-202ENST00000311550 NPIPB11E5RHQ5 1161 aa14.33□□□□□ -0.11
GABRB3-202ENST00000311550 PF4V1P10720 104 aa14.33□□□□□ -0.11
GABRB3-202ENST00000311550 SRSF7Q16629 238 aaKnown RBP eCLIP14.33□□□□□ -0.11
GABRB3-202ENST00000311550 TBR1Q16650 682 aa14.33□□□□□ -0.11
GABRB3-202ENST00000311550 OR52E5Q8NH55 327 aa14.33□□□□□ -0.11
GABRB3-202ENST00000311550 METTL26Q96S19 204 aa14.33□□□□□ -0.11
GABRB3-202ENST00000311550 MUC21A0A0G2JKD1 596 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 MUC21A0A140T8X8 626 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 MUC21Q5SSG8 566 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 TMEM170AQ8WVE7 144 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 SERF1AO75920 110 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 OCC1Q8TAD7 63 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 C1orf147Q96MC9 270 aaPredicted RBP14.33□□□□□ -0.12
GABRB3-202ENST00000311550 FBLL1A6NHQ2 334 aaKnown RBP14.33□□□□□ -0.12
GABRB3-202ENST00000311550 C9JQL5 133 aa14.33□□□□□ -0.12
GABRB3-202ENST00000311550 ADMP35318 185 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms