RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 FLYWCH2Q96CP2 140 aaKnown RBP9.42□□□□□ -0.9
PTPN2-201ENST00000309660 YTHDF2Q9Y5A9 579 aaKnown RBP9.42□□□□□ -0.9
PTPN2-201ENST00000309660 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 TRBV23-1A0A0A0MS06 115 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 LY86O95711 162 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 PLAUP00749 431 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
PTPN2-201ENST00000309660 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 NUBP1P53384 320 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 LINC01551Q86U37 167 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 OR2T10Q8NGZ9 312 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 C1orf159Q96HA4 380 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 F6UZH7 168 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 FCN3O75636 299 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 GCHFRP30047 84 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 AARDQ4LEZ3 155 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 PYY3Q5JQD4 70 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 E7EQL1 145 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 PRCDQ00LT1 54 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 NGBQ9NPG2 151 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
PTPN2-201ENST00000309660 MDFIC2A0A1B0GVS7 189 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 E7EUB6 86 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 ITGB1BP1O14713 200 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 SLC25A17O43808 307 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 OR2T6Q8NHC8 308 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 DIRC2Q96SL1 478 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 NABP2Q9BQ15 211 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 LSM4Q9Y4Z0 139 aaKnown RBP9.4□□□□□ -0.9
PTPN2-201ENST00000309660 ZZEF1O43149 2961 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.4□□□□□ -0.9
PTPN2-201ENST00000309660 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
PTPN2-201ENST00000309660 RBPJQ06330 500 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 PRSS8Q16651 343 aa9.4□□□□□ -0.9
PTPN2-201ENST00000309660 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.91
PTPN2-201ENST00000309660 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.91
PTPN2-201ENST00000309660 PMS2P11Q13670 270 aa9.4□□□□□ -0.91
PTPN2-201ENST00000309660 KCNIP4Q6PIL6 250 aa9.4□□□□□ -0.91
PTPN2-201ENST00000309660 SGMS2Q8NHU3 365 aa9.4□□□□□ -0.91
PTPN2-201ENST00000309660 RALYQ9UKM9 306 aaKnown RBP9.4□□□□□ -0.91
PTPN2-201ENST00000309660 WNK2Q9Y3S1 2297 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 IGHV3-21A0A0B4J1V1 117 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 TRAV20A0A0B4J274 112 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 XKRY2A2RUG3 117 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 H0YJW9 148 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 MT-CO2P00403 227 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 TGIF2LXQ8IUE1 241 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 CORO2AQ92828 525 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 RAB1CQ92928 201 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 SRD5A3Q9H8P0 318 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 TMPRSS3P57727 454 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 ERHP84090 104 aaKnown RBP9.39□□□□□ -0.91
PTPN2-201ENST00000309660 GAMTQ14353 236 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 NCOR1P1Q9H4R4 102 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 LY6HO94772 140 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 COX7A1P24310 79 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
PTPN2-201ENST00000309660 IGHV1-69-2A0A0G2JMI3 117 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 SLC17A3O00476 420 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 SPINK4O60575 86 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 MEF2CQ06413 473 aaPredicted RBP9.38□□□□□ -0.91
PTPN2-201ENST00000309660 C9orf152Q5JTZ5 239 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 HCP5Q6MZN7 132 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 PACRGQ96M98 296 aaPredicted RBP9.38□□□□□ -0.91
PTPN2-201ENST00000309660 PFDN5Q99471 154 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 VENTXO95231 258 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 CD3EP07766 207 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
PTPN2-201ENST00000309660 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 OSR1Q8TAX0 266 aaPredicted RBP9.38□□□□□ -0.91
PTPN2-201ENST00000309660 SLC35E1Q96K37 410 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 FKBP11Q9NYL4 201 aa9.38□□□□□ -0.91
PTPN2-201ENST00000309660 SHISA9B4DS77 424 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
PTPN2-201ENST00000309660 CRYBB3P26998 211 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 LOXP28300 417 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-201ENST00000309660 OR5I1Q13606 314 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 C19orf35Q6ZS72 473 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 ZNF833PQ6ZTB9 187 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 OR4C13Q8NGP0 309 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 OR5B3Q8NH48 314 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 SFRP2Q96HF1 295 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 RITA1Q96K30 269 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 UHRF2Q96PU4 802 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 OR51M1Q9H341 326 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 IL3RAP26951 378 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 SUMO1P63165 101 aaKnown RBP9.37□□□□□ -0.91
PTPN2-201ENST00000309660 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-201ENST00000309660 BET1LQ9NYM9 111 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms