RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OR2C3Q8N628 320 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 ZNF491Q8N8L2 437 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 UBE2E2Q96LR5 201 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 HSPB7Q9UBY9 170 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 NUDT19A8MXV4 375 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 CYB5BO43169 146 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 CDX1P47902 265 aaPredicted RBP19.05■□□□□ 0.64
HOXC9-201ENST00000303450 TNFRSF9Q07011 255 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 TATDN3Q17R31 274 aa19.05■□□□□ 0.64
HOXC9-201ENST00000303450 ADARB2-AS1A8MUL3 147 aa19.04■□□□□ 0.64
HOXC9-201ENST00000303450 CCSO14618 274 aa19.04■□□□□ 0.64
HOXC9-201ENST00000303450 RHOGP84095 191 aa19.04■□□□□ 0.64
HOXC9-201ENST00000303450 KIAA0141Q14154 515 aaPredicted RBP19.04■□□□□ 0.64
HOXC9-201ENST00000303450 KLHL30-AS1Q8NEE0 82 aa19.04■□□□□ 0.64
HOXC9-201ENST00000303450 F11RQ9Y624 299 aaKnown RBP19.04■□□□□ 0.64
HOXC9-201ENST00000303450 TRBV9A0A0B4J1U6 114 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 A0A0G2JLM5 398 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 C13orf42A0A1B0GVH6 325 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 FAM25EA8MYX2 175 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 INS-IGF2F8WCM5 200 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 HIST1H1BP16401 226 aaKnown RBP19.03■□□□□ 0.64
HOXC9-201ENST00000303450 SNCAP37840 140 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 DEFA5Q01523 94 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 OXA1LQ15070 435 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 C2orf68Q2NKX9 166 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 IAH1Q2TAA2 248 aaPredicted RBP19.03■□□□□ 0.64
HOXC9-201ENST00000303450 NECAP1Q8NC96 275 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 OR10C1Q96KK4 312 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 FANCD2OSQ96PS1 177 aa19.03■□□□□ 0.64
HOXC9-201ENST00000303450 HEYLQ9NQ87 328 aaPredicted RBP19.03■□□□□ 0.64
HOXC9-201ENST00000303450 FAM90A26D6RGX4 464 aa19.02■□□□□ 0.64
HOXC9-201ENST00000303450 M0QZ24 198 aa19.02■□□□□ 0.64
HOXC9-201ENST00000303450 OR2J3O76001 311 aa19.02■□□□□ 0.64
HOXC9-201ENST00000303450 SLC25A24Q6NUK1 477 aa19.02■□□□□ 0.64
HOXC9-201ENST00000303450 C18orf65Q6ZTR6 163 aa19.02■□□□□ 0.64
HOXC9-201ENST00000303450 USMG5Q96IX5 58 aa19.02■□□□□ 0.64
HOXC9-201ENST00000303450 IGLV11-55A0A075B6I3 123 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 C5orf51A6NDU8 294 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 FAM223BA6NKX1 122 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 SSNA1O43805 119 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 FAM223AQ8IWN6 122 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 OR1L6Q8NGR2 347 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 OR1P1Q8NH06 330 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 OR5B12Q96R08 314 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 P2RX4Q99571 388 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 HIPK2Q9H2X6 1198 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 RBKSQ9H477 322 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 GNB4Q9HAV0 340 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 THYN1Q9P016 225 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 GSKIPQ9P0R6 139 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 FBXL7Q9UJT9 491 aa19.01■□□□□ 0.63
HOXC9-201ENST00000303450 IGHV3-11P01762 117 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 ZNF114Q8NC26 417 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 DTD1Q8TEA8 209 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 C4orf3Q8WVX3 66 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 C7orf66A4D0T2 115 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 MED6O75586 246 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 SUB1P53999 127 aaKnown RBP eCLIP19■□□□□ 0.63
HOXC9-201ENST00000303450 ATP5G2Q06055 141 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 KLK9Q2XQG4 91 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 GSG1LQ6UXU4 331 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 C8orf86Q6ZUL3 223 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 ZBTB8BQ8NAP8 495 aaPredicted RBP19■□□□□ 0.63
HOXC9-201ENST00000303450 OR4D5Q8NGN0 318 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 KLK9Q9UKQ9 250 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 DMRT1Q9Y5R6 373 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 ALG5Q9Y673 324 aa19■□□□□ 0.63
HOXC9-201ENST00000303450 NKX2-1P43699 371 aaPredicted RBP18.99■□□□□ 0.63
HOXC9-201ENST00000303450 C15orf32Q32M92 178 aa18.99■□□□□ 0.63
HOXC9-201ENST00000303450 OR4F17Q8NGA8 305 aa18.99■□□□□ 0.63
HOXC9-201ENST00000303450 OR4F4Q96R69 305 aa18.99■□□□□ 0.63
HOXC9-201ENST00000303450 MAGT1Q9H0U3 335 aa18.99■□□□□ 0.63
HOXC9-201ENST00000303450 NDUFB8O95169 186 aa18.98■□□□□ 0.63
HOXC9-201ENST00000303450 HTR2BP41595 481 aa18.98■□□□□ 0.63
HOXC9-201ENST00000303450 MFAP2P55001 183 aa18.98■□□□□ 0.63
HOXC9-201ENST00000303450 GOSR2O14653 212 aa18.97■□□□□ 0.63
HOXC9-201ENST00000303450 SCGB1D2O95969 90 aa18.97■□□□□ 0.63
HOXC9-201ENST00000303450 LGALS1P09382 135 aaKnown RBP18.97■□□□□ 0.63
HOXC9-201ENST00000303450 ID3Q02535 119 aa18.97■□□□□ 0.63
HOXC9-201ENST00000303450 C2orf50Q96LR7 162 aa18.97■□□□□ 0.63
HOXC9-201ENST00000303450 I3L521 148 aa18.96■□□□□ 0.63
HOXC9-201ENST00000303450 WRBO00258 174 aa18.96■□□□□ 0.63
HOXC9-201ENST00000303450 SYNGR2O43760 224 aa18.96■□□□□ 0.63
HOXC9-201ENST00000303450 RNASE2P10153 161 aaKnown RBP18.96■□□□□ 0.63
HOXC9-201ENST00000303450 MISP3Q96FF7 219 aa18.96■□□□□ 0.63
HOXC9-201ENST00000303450 IAPPP10997 89 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 RUNX1Q01196 453 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 EXOSC2Q13868 293 aaKnown RBP18.95■□□□□ 0.62
HOXC9-201ENST00000303450 DEFB136Q30KP8 78 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 C11orf87Q6NUJ2 197 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 SLC24A4Q8NFF2 622 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 U3KQ87 197 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 IFNA10P01566 189 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 POLR2GP62487 172 aaKnown RBP eCLIP18.95■□□□□ 0.62
HOXC9-201ENST00000303450 BSXQ3C1V8 233 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 CXorf58Q96LI9 332 aa18.95■□□□□ 0.62
HOXC9-201ENST00000303450 CIB3Q96Q77 187 aaPredicted RBP18.95■□□□□ 0.62
HOXC9-201ENST00000303450 TRRAPQ9Y4A5 3859 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 SIX6O95475 246 aa18.94■□□□□ 0.62
HOXC9-201ENST00000303450 TSPAN15O95858 294 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms