RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 DUSP3P51452 185 aaPredicted RBP12.1□□□□□ -0.47
COL6A2-201ENST00000300527 PMCHL2Q9BQD1 86 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 GPR179Q6PRD1 2367 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 DMDP11532 3685 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 SMPD2O60906 423 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 TNFSF4P23510 183 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 HCFC1P51610 2035 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 UTF1Q5T230 341 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 TMEM251Q8N6I4 163 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 OR2T6Q8NHC8 308 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF576Q9H609 170 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 IGKV3D-15A0A087WSY6 115 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 SNAI2O43623 268 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 PROP1O75360 226 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
COL6A2-201ENST00000300527 TTTY12Q9BZ98 90 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 hDV102S1A0JD36 115 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 NRN1LQ496H8 165 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 C18orf32Q8TCD1 76 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 CT55Q8WUE5 264 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 GAL3ST2Q9H3Q3 398 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 DUSP13Q9UII6 198 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 LOC105371242A0A075B767 164 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 GGTLC3B5MD39 225 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 CA7P43166 264 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF137PP52743 207 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 OR4A47Q6IF82 309 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 FAM173AQ9BQD7 235 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
COL6A2-201ENST00000300527 NUDT3O95989 172 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 VDAC2P45880 294 aaPredicted RBP12.09□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF841Q6ZN19 808 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 LRRC29Q8WV35 223 aa12.09□□□□□ -0.47
COL6A2-201ENST00000300527 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
COL6A2-201ENST00000300527 C9JCJ5 164 aa12.08□□□□□ -0.48
COL6A2-201ENST00000300527 UBE2G1P62253 170 aa12.08□□□□□ -0.48
COL6A2-201ENST00000300527 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
COL6A2-201ENST00000300527 SPEM1Q8N4L4 309 aa12.08□□□□□ -0.48
COL6A2-201ENST00000300527 KLF14Q8TD94 323 aaPredicted RBP12.08□□□□□ -0.48
COL6A2-201ENST00000300527 C1orf159Q96HA4 380 aa12.08□□□□□ -0.48
COL6A2-201ENST00000300527 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.08□□□□□ -0.48
COL6A2-201ENST00000300527 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.48
COL6A2-201ENST00000300527 TRAV9-2A0A087WT02 112 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 PSG1P11464 419 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 EIF4EBP1Q13541 118 aaPredicted RBP12.07□□□□□ -0.48
COL6A2-201ENST00000300527 VHLLQ6RSH7 139 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 ACP7Q6ZNF0 438 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 ZNRF1Q8ND25 227 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 OR9G1Q8NH87 305 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 TRIB1Q96RU8 372 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
COL6A2-201ENST00000300527 TPRP12270 2363 aaKnown RBP12.07□□□□□ -0.48
COL6A2-201ENST00000300527 IGHV2OR16-5A0A0B4J2B6 119 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 CORTO00230 105 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 PYYP10082 97 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 ANKRD39Q53RE8 183 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 C19orf35Q6ZS72 473 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 ADAMTS20P59510 1910 aa12.07□□□□□ -0.48
COL6A2-201ENST00000300527 MED13Q9UHV7 2174 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 OR2T8A6NH00 312 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 CSN3P07498 182 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 LINC00173Q6ZV60 143 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 SPACA3Q8IXA5 215 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 TMEM167BQ9NRX6 74 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 H3BTX0 84 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 TOX4O94842 621 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 ZNF134P52741 427 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 OSTCQ9NRP0 149 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 OR4C46A6NHA9 309 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 GNG5P63218 68 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 BLNKQ8WV28 456 aa12.06□□□□□ -0.48
COL6A2-201ENST00000300527 CEP250Q9BV73 2442 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 CD46P15529 392 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 OR2Z1Q8NG97 314 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 PRDX2P32119 198 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 ZNF138P52744 262 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 SELENOVP59797 346 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 SMIM21Q3B7S5 101 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 WDR82Q6UXN9 313 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 SSX8Q7RTT4 187 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 NEUROG1Q92886 237 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 ZNRD1Q9P1U0 126 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms