RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZNF114Q8NC26 417 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 MED13LQ71F56 2210 aa10.3□□□□□ -0.76
PCF11-201ENST00000298281 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 A0A1B0GV90 55 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 CD160O95971 181 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 COX5BP10606 129 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 FOXD3Q9UJU5 478 aaPredicted RBP10.29□□□□□ -0.76
PCF11-201ENST00000298281 NPIPB9F8W1W9 429 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 NPIPB7O75200 414 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 UPK3AO75631 287 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 IGF2P01344 180 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 KLK2P20151 261 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 ERVK11-1P61568 191 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 J3QW42 95 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 CBLN2Q8IUK8 224 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 LINC01560Q8TB33 94 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 MED13Q9UHV7 2174 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 APOHP02749 345 aaPredicted RBP10.29□□□□□ -0.76
PCF11-201ENST00000298281 KLF12Q9Y4X4 402 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 GVINP1Q7Z2Y8 2422 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 ODAMA1E959 279 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 CRYBB3P26998 211 aa10.29□□□□□ -0.76
PCF11-201ENST00000298281 SAP30O75446 220 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 C1QAP02745 245 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 MIC13Q5XKP0 118 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 TMEM91Q6ZNR0 172 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 FOXA2Q9Y261 457 aaPredicted RBP10.28□□□□□ -0.76
PCF11-201ENST00000298281 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
PCF11-201ENST00000298281 COLCA1Q6ZS62 124 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 ZAR1Q86SH2 424 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 ST20Q9HBF5 79 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 PLXND1Q9Y4D7 1925 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 ZNHIT1O43257 154 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 C5orf47Q569G3 176 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 KCNK7Q9Y2U2 307 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 STRCP1A6NGW2 1772 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 IGKV1D-33P01593 117 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 IGKV1-33P01594 117 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 IGHV3-11P01762 117 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 VKORC1Q9BQB6 163 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 PCNX1Q96RV3 2341 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 OR2H2O95918 312 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 C8orf82Q6P1X6 216 aaPredicted RBP10.28□□□□□ -0.76
PCF11-201ENST00000298281 FOXJ2Q9P0K8 574 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 IGHV3OR16-8A0A075B7F1 116 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 IGHV1-45A0A0A0MS14 117 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 CXorf65A6NEN9 183 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 MOSP00540 346 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 MYOD1P15172 320 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 TRAF4Q9BUZ4 470 aaPredicted RBP10.28□□□□□ -0.76
PCF11-201ENST00000298281 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
PCF11-201ENST00000298281 EML6Q6ZMW3 1958 aa10.28□□□□□ -0.76
PCF11-201ENST00000298281 JPT1Q9UK76 154 aa10.27□□□□□ -0.76
PCF11-201ENST00000298281 KLK13Q9UKR3 277 aa10.27□□□□□ -0.76
PCF11-201ENST00000298281 CHKB-CPT1BH3BT56 60 aa10.27□□□□□ -0.76
PCF11-201ENST00000298281 PLA2G10O15496 165 aa10.27□□□□□ -0.76
PCF11-201ENST00000298281 C8orf88P0DMB2 117 aa10.27□□□□□ -0.76
PCF11-201ENST00000298281 TAF15Q92804 592 aaKnown RBP eCLIP10.27□□□□□ -0.76
PCF11-201ENST00000298281 SLC25A28Q96A46 364 aa10.27□□□□□ -0.76
PCF11-201ENST00000298281 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.76
PCF11-201ENST00000298281 hADV29S1A0JD25 119 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 TCRAP04437 139 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.27□□□□□ -0.77
PCF11-201ENST00000298281 ATAD5Q96QE3 1844 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 OR9G1Q8NH87 305 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 CA7P43166 264 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 C14orf144Q96I85 54 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 C22orf46C9J442 243 aa10.27□□□□□ -0.77
PCF11-201ENST00000298281 IGHV3-73A0A0B4J1V6 119 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 PLAC1Q9HBJ0 212 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 RCC1P18754 421 aaPredicted RBP10.26□□□□□ -0.77
PCF11-201ENST00000298281 CBLN1P23435 193 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 COQ2Q96H96 371 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 A0A1W2PQF6 199 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 ZNF729A6NN14 1252 aaPredicted RBP10.26□□□□□ -0.77
PCF11-201ENST00000298281 SLC25A47Q6Q0C1 308 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 CRIM1Q9NZV1 1036 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 CLDN16Q9Y5I7 305 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 ANK1P16157 1881 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 A0A1W2PP11 408 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 GLRXP35754 106 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 PPP1R27Q86WC6 154 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 ST6GALNAC6Q969X2 333 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 WFIKKN1Q96NZ8 548 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 FBXL7Q9UJT9 491 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 HS3ST3B1Q9Y662 390 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 PSMG4Q5JS54 123 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 ZNRF1Q8ND25 227 aa10.26□□□□□ -0.77
PCF11-201ENST00000298281 MORN3Q6PF18 240 aaPredicted RBP10.25□□□□□ -0.77
PCF11-201ENST00000298281 FGFRL1Q8N441 504 aa10.25□□□□□ -0.77
PCF11-201ENST00000298281 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
PCF11-201ENST00000298281 GP6Q9HCN6 339 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms