RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 RUSC1-AS1Q66K80 236 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 CENPVQ7Z7K6 275 aaPredicted RBP18.24■□□□□ 0.51
PTX3-201ENST00000295927 Q8N6K4 173 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 LYPD6BQ8NI32 183 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 C7orf69Q9H7B7 122 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 NAV3Q8IVL0 2385 aa18.24■□□□□ 0.51
PTX3-201ENST00000295927 TRAV20A0A0B4J274 112 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 TRAV40A0A0B4J280 105 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 I3L521 148 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 SERF2P84101 59 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 ARSJQ5FYB0 599 aaPredicted RBP18.23■□□□□ 0.51
PTX3-201ENST00000295927 IGLC7A0M8Q6 106 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 Q5PR19 223 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 TREML4Q6UXN2 200 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 LINC01356Q8N9X3 169 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 NPCDR1Q9BY65 106 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 APCP25054 2843 aa18.23■□□□□ 0.51
PTX3-201ENST00000295927 TMEM11P17152 192 aa18.22■□□□□ 0.51
PTX3-201ENST00000295927 FAM120AOSQ5T036 256 aa18.22■□□□□ 0.51
PTX3-201ENST00000295927 MBD6Q96DN6 1003 aa18.22■□□□□ 0.51
PTX3-201ENST00000295927 VSIRQ9H7M9 311 aa18.22■□□□□ 0.51
PTX3-201ENST00000295927 NUDT19A8MXV4 375 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 RNF223E7ERA6 249 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 REG1AP05451 166 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 BRS3P32247 399 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 LOXL1Q08397 574 aaPredicted RBP18.21■□□□□ 0.51
PTX3-201ENST00000295927 C5orf64Q2M2E5 130 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 IL34Q6ZMJ4 242 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 SRSF12Q8WXF0 261 aaKnown RBP18.21■□□□□ 0.51
PTX3-201ENST00000295927 P2RX4Q99571 388 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 NPVFQ9HCQ7 196 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTX3-201ENST00000295927 RAB19A4D1S5 217 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 TEX22C9J3V5 150 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 FAM106CPP0CH98 169 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 DPPA3Q6W0C5 159 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 BRD3OSQ6XYD6 125 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 MRPL41Q8IXM3 137 aaKnown RBP18.21■□□□□ 0.51
PTX3-201ENST00000295927 ZNF709Q8N972 641 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 MAPK1IP1LQ8NDC0 245 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 RPRMQ9NS64 109 aa18.21■□□□□ 0.51
PTX3-201ENST00000295927 NAV2Q8IVL1 2488 aa18.2■□□□□ 0.5
PTX3-201ENST00000295927 IGHV4-38-2P0DP08 117 aa18.2■□□□□ 0.5
PTX3-201ENST00000295927 GATA3P23771 443 aa18.2■□□□□ 0.5
PTX3-201ENST00000295927 SUB1P53999 127 aaKnown RBP eCLIP18.2■□□□□ 0.5
PTX3-201ENST00000295927 ELLP55199 621 aaPredicted RBP18.2■□□□□ 0.5
PTX3-201ENST00000295927 TOR2AQ5JU69 321 aa18.2■□□□□ 0.5
PTX3-201ENST00000295927 SVEP1Q4LDE5 3571 aa18.2■□□□□ 0.5
PTX3-201ENST00000295927 NCBP2LA6PVI3 153 aaKnown RBP18.19■□□□□ 0.5
PTX3-201ENST00000295927 FNDC10F2Z333 226 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 MPDU1O75352 247 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 TSPAN15O95858 294 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 APELAP0DMC3 54 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 AREGP15514 252 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 C17orf112F2Z3M2 114 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 CNIH1O95406 144 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 ACSM6Q6P461 480 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 CR1P17927 2039 aa18.19■□□□□ 0.5
PTX3-201ENST00000295927 AGPAT2O15120 278 aa18.18■□□□□ 0.5
PTX3-201ENST00000295927 MLANAQ16655 118 aa18.18■□□□□ 0.5
PTX3-201ENST00000295927 TMEM41BQ5BJD5 291 aa18.18■□□□□ 0.5
PTX3-201ENST00000295927 MGST2Q99735 147 aa18.18■□□□□ 0.5
PTX3-201ENST00000295927 LSM4Q9Y4Z0 139 aaKnown RBP18.18■□□□□ 0.5
PTX3-201ENST00000295927 NBPF19A0A087WUL8 3843 aa18.18■□□□□ 0.5
PTX3-201ENST00000295927 AVPP01185 164 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 H2AFB1P0C5Y9 115 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 AKR1C1Q04828 323 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 CD69Q07108 199 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 RNASEH2CQ8TDP1 164 aaKnown RBP18.17■□□□□ 0.5
PTX3-201ENST00000295927 SSMEM1Q8WWF3 244 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 FFAR4Q5NUL3 377 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 TEPPQ6URK8 271 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 KRTAP1-3Q8IUG1 177 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 ZNF114Q8NC26 417 aa18.17■□□□□ 0.5
PTX3-201ENST00000295927 A0A0U1RQK1 487 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 A0A1B0GV50 99 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 RAB2AP61019 212 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 SRSF3P84103 164 aaKnown RBP18.16■□□□□ 0.5
PTX3-201ENST00000295927 FXYD3Q14802 87 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 UQCC3Q6UW78 93 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 PRSS57Q6UWY2 283 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 Q96MF0 132 aa18.16■□□□□ 0.5
PTX3-201ENST00000295927 GPX4P36969 197 aaPredicted RBP18.15■□□□□ 0.5
PTX3-201ENST00000295927 GAMTQ14353 236 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 KLF17Q5JT82 389 aaPredicted RBP18.15■□□□□ 0.5
PTX3-201ENST00000295927 SPSB3Q6PJ21 355 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 C19orf35Q6ZS72 473 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 CACNG8Q8WXS5 425 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 SRSF8Q9BRL6 282 aaKnown RBP18.15■□□□□ 0.5
PTX3-201ENST00000295927 GGTLC1Q9BX51 225 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 C1RLQ9NZP8 487 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 TGFAP01135 160 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 MFAP2P55001 183 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 ZNF726P1Q15940 193 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 PVRIGQ6DKI7 326 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 SLC16A13Q7RTY0 426 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 Q8N9W7 124 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 SFT2D1Q8WV19 159 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 LINC00052Q96N35 136 aa18.15■□□□□ 0.5
PTX3-201ENST00000295927 MBP02144 154 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms