RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 JKAMPQ9P055 326 aa20.45■□□□□ 0.86
ROM1-201ENST00000278833 COL6A6A6NMZ7 2263 aa20.44■□□□□ 0.86
ROM1-201ENST00000278833 IL3RAP26951 378 aa20.44■□□□□ 0.86
ROM1-201ENST00000278833 GNG10P50151 68 aa20.44■□□□□ 0.86
ROM1-201ENST00000278833 RPL15P61313 204 aaKnown RBP20.44■□□□□ 0.86
ROM1-201ENST00000278833 DERL1Q9BUN8 251 aa20.44■□□□□ 0.86
ROM1-201ENST00000278833 YTHDF2Q9Y5A9 579 aaKnown RBP20.44■□□□□ 0.86
ROM1-201ENST00000278833 TRBV20OR9-2A0A075B6H5 130 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 MDFIC2A0A1B0GVS7 189 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 C16orf97H3BN30 126 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 DEFB108BQ8NET1 73 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 CFAP46Q8IYW2 2715 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 BMP5P22003 454 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 ADIPOQQ15848 244 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 PDZD11Q5EBL8 140 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 LINC00311Q8N616 119 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 SEPSECSQ9HD40 501 aaKnown RBP20.43■□□□□ 0.86
ROM1-201ENST00000278833 TMEM167BQ9NRX6 74 aa20.43■□□□□ 0.86
ROM1-201ENST00000278833 A0A0G2JNJ9 132 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 SCO2A0A1W2PP80 73 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 IGFBP2P18065 325 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 CHRNA7P36544 502 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 TMEM177Q53S58 311 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 ZNF114Q8NC26 417 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 UHRF2Q96PU4 802 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 Q9UFV3 132 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 FUT9Q9Y231 359 aa20.42■□□□□ 0.86
ROM1-201ENST00000278833 TEX50A0A1B0GTY4 177 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 XKRY2A2RUG3 117 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 GATCO43716 136 aaKnown RBP20.41■□□□□ 0.86
ROM1-201ENST00000278833 AMBPP02760 352 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 KLRB1Q12918 225 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 JOSD1Q15040 202 aaPredicted RBP20.41■□□□□ 0.86
ROM1-201ENST00000278833 FAM78BQ5VT40 261 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 DOLPP1Q86YN1 238 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 OR5AN1Q8NGI8 311 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 OR4A5Q8NH83 315 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 SRRM4A7MD48 611 aaKnown RBP20.41■□□□□ 0.86
ROM1-201ENST00000278833 PRRG2O14669 202 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 TNFRSF13BO14836 293 aaPredicted RBP20.41■□□□□ 0.86
ROM1-201ENST00000278833 APOA2P02652 100 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 TEX38Q6PEX7 206 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 CADP27708 2225 aa20.41■□□□□ 0.86
ROM1-201ENST00000278833 DPRXA6NFQ7 191 aa20.4■□□□□ 0.86
ROM1-201ENST00000278833 IGKV1-16P04430 117 aa20.4■□□□□ 0.86
ROM1-201ENST00000278833 SAA1P0DJI8 122 aaPredicted RBP20.4■□□□□ 0.86
ROM1-201ENST00000278833 RNASE2P10153 161 aaKnown RBP20.4■□□□□ 0.86
ROM1-201ENST00000278833 SPATA31B1PQ5VZV4 182 aa20.4■□□□□ 0.86
ROM1-201ENST00000278833 CDPF1Q6NVV7 123 aa20.4■□□□□ 0.86
ROM1-201ENST00000278833 Q8NA96 180 aa20.4■□□□□ 0.86
ROM1-201ENST00000278833 ZNF714Q96N38 554 aa20.4■□□□□ 0.86
ROM1-201ENST00000278833 PRB1P04280 392 aa20.39■□□□□ 0.86
ROM1-201ENST00000278833 OR5G3P0C626 314 aa20.39■□□□□ 0.86
ROM1-201ENST00000278833 CACNG8Q8WXS5 425 aa20.39■□□□□ 0.86
ROM1-201ENST00000278833 DCAF16Q9NXF7 216 aa20.39■□□□□ 0.86
ROM1-201ENST00000278833 TRAV20A0A0B4J274 112 aa20.39■□□□□ 0.85
ROM1-201ENST00000278833 H0YJW9 148 aa20.39■□□□□ 0.85
ROM1-201ENST00000278833 OR4A8P0C604 315 aa20.39■□□□□ 0.85
ROM1-201ENST00000278833 MYOD1P15172 320 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 NDUFB7P17568 137 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 GPX4P36969 197 aaPredicted RBP20.38■□□□□ 0.85
ROM1-201ENST00000278833 YPEL3P61236 119 aaPredicted RBP20.38■□□□□ 0.85
ROM1-201ENST00000278833 RPL31P62899 125 aaKnown RBP20.38■□□□□ 0.85
ROM1-201ENST00000278833 FAM209BQ5JX69 171 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 PQLC2Q6ZP29 291 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 OR10G8Q8NGN5 311 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 NABP2Q9BQ15 211 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 NDUFA4L2Q9NRX3 87 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 TECRQ9NZ01 308 aaKnown RBP20.38■□□□□ 0.85
ROM1-201ENST00000278833 ZNF835Q9Y2P0 537 aa20.38■□□□□ 0.85
ROM1-201ENST00000278833 TMEM178BH3BS89 294 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 THBDP07204 575 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 PAX1P15863 534 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 ZNF137PP52743 207 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 CD69Q07108 199 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 PDPNQ86YL7 162 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 OCC1Q8TAD7 63 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 TMEM167AQ8TBQ9 72 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 MRPL20Q9BYC9 149 aaKnown RBP20.37■□□□□ 0.85
ROM1-201ENST00000278833 USF1P22415 310 aaPredicted RBP20.37■□□□□ 0.85
ROM1-201ENST00000278833 CNN1P51911 297 aaKnown RBP20.37■□□□□ 0.85
ROM1-201ENST00000278833 OR4P4Q8NGL7 312 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 RNF2Q99496 336 aa20.37■□□□□ 0.85
ROM1-201ENST00000278833 MRPL32Q9BYC8 188 aaKnown RBP20.37■□□□□ 0.85
ROM1-201ENST00000278833 PPIAL4EA0A075B759 164 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 PPIAL4DF5H284 164 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 PPIAL4FP0DN26 164 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 PKIAP61925 76 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 CCL8P80075 99 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 VSTM2AQ8TAG5 236 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 SNRNP40Q96DI7 357 aaKnown RBP20.36■□□□□ 0.85
ROM1-201ENST00000278833 HINT2Q9BX68 163 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 PPIAL4AQ9Y536 164 aa20.36■□□□□ 0.85
ROM1-201ENST00000278833 A0A087X0M5 115 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 A0A1B0GX30 115 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 A0A1W2PN81 502 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 GCGP01275 180 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 GAMTQ14353 236 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 MIR17HGQ75NE6 70 aa20.35■□□□□ 0.85
ROM1-201ENST00000278833 OR5T1Q8NG75 326 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms