RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 FAM19A2Q8N3H0 131 aa13.2□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ZNF596Q8TC21 504 aa13.2□□□□□ -0.3
MAP1LC3B-201ENST00000268607 FAM215AQ9Y5M1 114 aa13.2□□□□□ -0.3
MAP1LC3B-201ENST00000268607 PKDREJQ9NTG1 2253 aa13.2□□□□□ -0.3
MAP1LC3B-201ENST00000268607 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ZNF826PQ6ZT77 177 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 Q8N7P7 452 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 IL36BQ9NZH7 164 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 TRAPPC2LQ9UL33 140 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 PLCE1Q9P212 2302 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RBMXL2O75526 392 aaKnown RBP13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 PRRX1P54821 245 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
MAP1LC3B-201ENST00000268607 FLNCQ14315 2725 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 NPIPB11E5RHQ5 1161 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 K7EN84 100 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 SPINK4O60575 86 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 MRPL49Q13405 166 aaKnown RBP13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 Q6ZT83 130 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OBP2BQ9NPH6 170 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 UTP20O75691 2785 aaKnown RBP13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 J3QT63 122 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 FABP6P51161 128 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RIPPLY3P57055 190 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RHOGP84095 191 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OR4A47Q6IF82 309 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ZNF808Q8N4W9 903 aaPredicted RBP13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 KLF14Q8TD94 323 aaPredicted RBP13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RTL8AQ9BWD3 113 aa13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 MAP1AP78559 2803 aaPredicted RBP13.18□□□□□ -0.3
MAP1LC3B-201ENST00000268607 S1PR2O95136 353 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OR2H2O95918 312 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RPL30P62888 115 aaKnown RBP13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 FAM53AQ6NSI3 398 aaPredicted RBP13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 WNT9BO14905 357 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 COL8A2P25067 703 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 LGALS4P56470 323 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 Q6P435 159 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 NIT1Q86X76 327 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
MAP1LC3B-201ENST00000268607 NTF3P20783 257 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ABCA4P78363 2273 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RRHO14718 337 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 ZNF324O75467 553 aaPredicted RBP13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 HOXC12P31275 282 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 PKIBQ9C010 78 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 IL19Q9UHD0 177 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 CDC42EP3Q9UKI2 254 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OR2T8A6NH00 312 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 P0C879 139 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RELBQ01201 579 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 MMD2Q8IY49 270 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 MUC15Q8N387 334 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 CLEC7AQ9BXN2 247 aa13.16□□□□□ -0.3
MAP1LC3B-201ENST00000268607 CA2P00918 260 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 CD1BP29016 333 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 STUMQ69YW2 141 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 AMMECR1LQ6DCA0 310 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 GFRALQ6UXV0 394 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 C22orf34Q6ZV56 151 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 RAB1CQ92928 201 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 OR2D2Q9H210 308 aa13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 YTHDF2Q9Y5A9 579 aaKnown RBP13.15□□□□□ -0.3
MAP1LC3B-201ENST00000268607 GABRA2P47869 451 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 LINC00205P59089 165 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SLC35B1P78383 322 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 GUSBP1Q15486 140 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RPEL1Q2QD12 228 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MPV17L2Q567V2 206 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PRAMEF6Q5VXH4 476 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PNKDQ8N490 385 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 OR5B3Q8NH48 314 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MEGF9Q9H1U4 602 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RALYQ9UKM9 306 aaKnown RBP13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TACC2O95359 2948 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 C17orf98A8MV24 154 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CECR9P0C854 216 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RAC2P15153 192 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 HTD2P86397 168 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 HIVEP3Q5T1R4 2406 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TRAV9-1A0A075B6T8 112 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 K7ERU9 68 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TAX1BP3O14907 124 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 IGLL1P15814 213 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 BRWD1-AS2P59051 145 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms