RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 DPM3Q9P2X0 92 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 H3BQ15 152 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 B2MP61769 119 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 RAB31Q13636 194 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 GAMTQ14353 236 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 GATAD1Q8WUU5 269 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 SIGLEC9Q9Y336 463 aa19.29■□□□□ 0.68
TSPAN13-201ENST00000262067 TACC2O95359 2948 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 ATF4P18848 351 aaPredicted RBP19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 CD69Q07108 199 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 TMEM144Q7Z5S9 345 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 IQCF2Q8IXL9 164 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 MMD2Q8IY49 270 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 STPG3Q8N7X2 389 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 KCNIP2Q9NS61 270 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 A0A1W2PPV4 95 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 ODF3BA8MYP8 253 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 TIMM23O14925 209 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 RPL29P47914 159 aaKnown RBP19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 FAM90A2PQ658T7 463 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 LHFPL4Q7Z7J7 247 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 P2RX4Q99571 388 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 HILPDAQ9Y5L2 63 aa19.28■□□□□ 0.68
TSPAN13-201ENST00000262067 IGKV1OR2-108A0A075B7D4 117 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 A0A1W2PRD5 423 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 A0A1W2PRF3 423 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 A0A1W2PRM7 423 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 PRB1P04280 392 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 RNF224P0DH78 156 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 C1orf122Q6ZSJ8 110 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 SLC35E3Q7Z769 313 aa19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 METTL1Q9UBP6 276 aaKnown RBP19.27■□□□□ 0.68
TSPAN13-201ENST00000262067 TNXAQ16473 311 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 VMO1Q7Z5L0 202 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 IGFBPL1Q8WX77 278 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 SMCO4Q9NRQ5 59 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 REG1AP05451 166 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 PSMB3P49720 205 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 CD81P60033 236 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 LCN2P80188 198 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 PRR20EP86478 221 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 PRR20CP86479 221 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 PRR20DP86480 221 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 PRR20BP86481 221 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 PRR20AP86496 221 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 BPESC1Q9GZL8 116 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 SLC45A2Q9UMX9 530 aa19.26■□□□□ 0.67
TSPAN13-201ENST00000262067 ACTL6BO94805 426 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 LINC00869P0C866 280 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 PAX6P26367 422 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 MEF2BQ02080 365 aaPredicted RBP19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 RHEBQ15382 184 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 KIR3DL3Q8N743 410 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 FBXL15Q9H469 300 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 CACNA1BQ00975 2339 aa19.25■□□□□ 0.67
TSPAN13-201ENST00000262067 VENTXO95231 258 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 GPX4P36969 197 aaPredicted RBP19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 RPL27AP46776 148 aaKnown RBP19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 SUB1P53999 127 aaKnown RBP eCLIP19.24■□□□□ 0.673e-6■■■□□ 16.5
TSPAN13-201ENST00000262067 PAX2Q02962 417 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 SLC16A13Q7RTY0 426 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 PPP1R27Q86WC6 154 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 OR2T6Q8NHC8 308 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 CACNG8Q8WXS5 425 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 RNF5Q99942 180 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 MANBALQ9NQG1 85 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 USP24Q9UPU5 2620 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 LOC105371267A0A1B0GV96 52 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 IGLC7A0M8Q6 106 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 IGHV4-39P01824 125 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 CEACAM3P40198 252 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 ABHD5Q8WTS1 349 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 BBC3Q96PG8 261 aaPredicted RBP19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 NIPSNAP3BQ9BS92 247 aa19.24■□□□□ 0.67
TSPAN13-201ENST00000262067 MAS1LP35410 378 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 COMPP49747 757 aaPredicted RBP19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 LMO4P61968 165 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 GNB1P62873 340 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 TMEM249Q2WGJ8 235 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 RNASEH2CQ8TDP1 164 aaKnown RBP19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 CFHR4Q92496 578 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 PAGE4O60829 102 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 OR10J1P30954 320 aa19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 FNDC4Q9H6D8 234 aaPredicted RBP19.23■□□□□ 0.67
TSPAN13-201ENST00000262067 FCN1O00602 326 aa19.22■□□□□ 0.67
TSPAN13-201ENST00000262067 TVP23CQ96ET8 276 aa19.22■□□□□ 0.67
TSPAN13-201ENST00000262067 SIRPDQ9H106 197 aa19.22■□□□□ 0.67
TSPAN13-201ENST00000262067 SEPSECSQ9HD40 501 aaKnown RBP19.22■□□□□ 0.67
TSPAN13-201ENST00000262067 STAG3L2P0CL84 134 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 STAG3L3P0CL85 134 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 APELAP0DMC3 54 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 AREGP15514 252 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 HOXB4P17483 251 aaPredicted RBP19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 TAGLN2P37802 199 aaKnown RBP19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 ACY3Q96HD9 319 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 SLC35E1Q96K37 410 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 COLCA2A8K830 154 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 GATA2P23769 480 aaPredicted RBP19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 SPATA31B1PQ5VZV4 182 aa19.21■□□□□ 0.67
TSPAN13-201ENST00000262067 IGHV2-70DA0A0C4DH43 119 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms