RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 MSMBP08118 114 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 RHOGP84095 191 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 TPTE2P1Q5T6R2 138 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 FAM159AQ6UWV7 190 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 H3BUX3 64 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 CSN3P07498 182 aa11.56□□□□□ -0.56
CDH1-201ENST00000261769 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
CDH1-201ENST00000261769 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
CDH1-201ENST00000261769 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
CDH1-201ENST00000261769 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 CEACAM4O75871 244 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 S4R3C0 116 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 ZNF207O43670 478 aaKnown RBP11.55□□□□□ -0.56
CDH1-201ENST00000261769 NDUFB4O95168 129 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 ZNF600Q6ZNG1 722 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 ZGRF1Q86YA3 2104 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 C2CD4CQ8TF44 421 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 ZNF253O75346 499 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 CD69Q07108 199 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 FAM215AQ9Y5M1 114 aa11.55□□□□□ -0.56
CDH1-201ENST00000261769 FAM24BQ8N5W8 94 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 Q6ZN92 141 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 CD177Q8N6Q3 437 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 GPR82Q96P67 336 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 TEX50A0A1B0GTY4 177 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 H3BQ15 152 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 PSPNO60542 156 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 CRISP2P16562 243 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 PRTN3P24158 256 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 FANCMQ8IYD8 2048 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 ABCA1O95477 2261 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
CDH1-201ENST00000261769 ARL14EPLP0DKL9 152 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 WT1P19544 449 aaPredicted RBP11.54□□□□□ -0.56
CDH1-201ENST00000261769 TWIST1Q15672 202 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 SMUG1Q53HV7 270 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 AWAT1Q58HT5 328 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 AMMECR1LQ6DCA0 310 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
CDH1-201ENST00000261769 IGKV1D-13A0A0B4J2D9 117 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 FAM90A9PA6NNJ1 464 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 TCAPO15273 167 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 IGKV3-20P01619 116 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 AMY1AP04745 511 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 IGKV1-13P0DP09 117 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 ANOS1P23352 680 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 MPZP25189 248 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
CDH1-201ENST00000261769 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 MLNRO43193 412 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 LY6HO94772 140 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 MFAP2P55001 183 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 EGR1P18146 543 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 HERVK_113P61574 105 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 RELBQ01201 579 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 RTBDNQ9BSG5 229 aaPredicted RBP11.53□□□□□ -0.56
CDH1-201ENST00000261769 TRAF4Q9BUZ4 470 aaPredicted RBP11.53□□□□□ -0.56
CDH1-201ENST00000261769 BET1LQ9NYM9 111 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 FUT9Q9Y231 359 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 EFNB3Q15768 340 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
CDH1-201ENST00000261769 ZNF660Q6AZW8 331 aaPredicted RBP11.53□□□□□ -0.56
CDH1-201ENST00000261769 TMEM144Q7Z5S9 345 aa11.53□□□□□ -0.56
CDH1-201ENST00000261769 LILRA1O75019 489 aa11.52□□□□□ -0.56
CDH1-201ENST00000261769 ZNF324BQ6AW86 544 aaPredicted RBP11.52□□□□□ -0.56
CDH1-201ENST00000261769 ZNF257Q9Y2Q1 563 aa11.52□□□□□ -0.56
CDH1-201ENST00000261769 FER1L5A0AVI2 2057 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 IGHV1-3A0A0C4DH29 117 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 OR4C46A6NHA9 309 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 HSPB1P04792 205 aaKnown RBP11.52□□□□□ -0.57
CDH1-201ENST00000261769 TRGC1P0CF51 173 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 AGAP20933 346 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 GOLT1AQ6ZVE7 132 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 Q96MF0 132 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 RPRMQ9NS64 109 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 CADP27708 2225 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 DMRTA2Q96SC8 542 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 UBE2L6O14933 153 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 CXCL2P19875 107 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 H2BFSP57053 126 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 DEFA6Q01524 100 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 KLRD1Q13241 179 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 ICAM4Q14773 271 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 SIGIRRQ6IA17 410 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 HIST1H2BAQ96A08 127 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 RNF114Q9Y508 228 aa11.52□□□□□ -0.57
CDH1-201ENST00000261769 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 GCHFRP30047 84 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms