RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 CENPWQ5EE01 88 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 MISP3Q96FF7 219 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 CRISP2P16562 243 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 CRYBB3P26998 211 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 OR10J1P30954 320 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 ATP5IP56385 69 aaPredicted RBP15.29■□□□□ 0.04
CPSF3-201ENST00000238112 TAS2R45P59539 299 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 OR5I1Q13606 314 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 C2orf83Q53S99 150 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 PQLC2Q6ZP29 291 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 MMD2Q8IY49 270 aa15.29■□□□□ 0.04
CPSF3-201ENST00000238112 hADV38S2A0JD32 116 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 FCN1O00602 326 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 NDUFB7P17568 137 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 OR5B3Q8NH48 314 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 ZNRD1Q9P1U0 126 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 IGKV1OR2-108A0A075B7D4 117 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 RNF224P0DH78 156 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 SAA1P0DJI8 122 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-201ENST00000238112 GATA2P23769 480 aaPredicted RBP15.28■□□□□ 0.04
CPSF3-201ENST00000238112 IER3P46695 156 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 TPPP2P59282 170 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 RND1Q92730 232 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 C19orf24Q9BVV8 132 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 BET1LQ9NYM9 111 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 V9GYV3 84 aa15.28■□□□□ 0.04
CPSF3-201ENST00000238112 OR1L8Q8NGR8 309 aa15.27■□□□□ 0.04
CPSF3-201ENST00000238112 SNRNP40Q96DI7 357 aaKnown RBP15.27■□□□□ 0.04
CPSF3-201ENST00000238112 DSCAML1Q8TD84 2053 aa15.27■□□□□ 0.03
CPSF3-201ENST00000238112 PAFAH1B2P68402 229 aa15.27■□□□□ 0.03
CPSF3-201ENST00000238112 RPL19P84098 196 aaKnown RBP15.27■□□□□ 0.03
CPSF3-201ENST00000238112 NKX6-3A6NJ46 265 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 ZNF705FA8MVS1 300 aaPredicted RBP15.26■□□□□ 0.03
CPSF3-201ENST00000238112 SNURFLB1AK76 121 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 OR5G3P0C626 314 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 ZNF705DP0CH99 300 aaPredicted RBP15.26■□□□□ 0.03
CPSF3-201ENST00000238112 ZNF705BP0CI00 300 aaPredicted RBP15.26■□□□□ 0.03
CPSF3-201ENST00000238112 CD40P25942 277 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 FAM27E3Q08E93 113 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 TIGITQ495A1 244 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 KRTCAP3Q53RY4 240 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 OR8I2Q8N0Y5 310 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 ZNF503Q96F45 646 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 POLR3KQ9Y2Y1 108 aaPredicted RBP15.26■□□□□ 0.03
CPSF3-201ENST00000238112 LINC00312Q9Y6C7 94 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 TANC2Q9HCD6 1990 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 APOA2P02652 100 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 OR10J4P0C629 311 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 RNASE2P10153 161 aaKnown RBP15.26■□□□□ 0.03
CPSF3-201ENST00000238112 RANP62826 216 aaKnown RBP15.26■□□□□ 0.03
CPSF3-201ENST00000238112 C1orf194Q5T5A4 169 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 TEX36Q5VZQ5 186 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 DOLPP1Q86YN1 238 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 GAL3ST2Q9H3Q3 398 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 PARD6AQ9NPB6 346 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 DCAF16Q9NXF7 216 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 TP53TG3Q9ULZ0 132 aa15.26■□□□□ 0.03
CPSF3-201ENST00000238112 TRBV9A0A0B4J1U6 114 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 IGFL3Q6UXB1 125 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 BAGE3Q86Y29 109 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 BAGE2Q86Y30 109 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 PNKDQ8N490 385 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 OR9G1Q8NH87 305 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 OSR1Q8TAX0 266 aaPredicted RBP15.25■□□□□ 0.03
CPSF3-201ENST00000238112 HARBI1Q96MB7 349 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 COMMD5Q9GZQ3 224 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 ASPMQ8IZT6 3477 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 SERF1AO75920 110 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 CD69Q07108 199 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 MLANAQ16655 118 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 ZNF833PQ6ZTB9 187 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 OR10W1Q8NGF6 305 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 MRPL20Q9BYC9 149 aaKnown RBP15.25■□□□□ 0.03
CPSF3-201ENST00000238112 TMEM106BQ9NUM4 274 aa15.25■□□□□ 0.03
CPSF3-201ENST00000238112 RAI1Q7Z5J4 1906 aaPredicted RBP15.24■□□□□ 0.03
CPSF3-201ENST00000238112 GGTLC3B5MD39 225 aa15.24■□□□□ 0.03
CPSF3-201ENST00000238112 C8orf88P0DMB2 117 aa15.24■□□□□ 0.03
CPSF3-201ENST00000238112 CCL8P80075 99 aa15.24■□□□□ 0.03
CPSF3-201ENST00000238112 C22orf34Q6ZV56 151 aa15.24■□□□□ 0.03
CPSF3-201ENST00000238112 GNB1LQ9BYB4 327 aa15.24■□□□□ 0.03
CPSF3-201ENST00000238112 ESDP10768 282 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 SUMO1P63165 101 aaKnown RBP15.23■□□□□ 0.03
CPSF3-201ENST00000238112 ERHP84090 104 aaKnown RBP15.23■□□□□ 0.03
CPSF3-201ENST00000238112 TBX15Q96SF7 602 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 RNASE7Q9H1E1 156 aaKnown RBP15.23■□□□□ 0.03
CPSF3-201ENST00000238112 CFAP47Q6ZTR5 3102 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 ZFHX4Q86UP3 3567 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 KIR2DL5BA0A0G2JN68 375 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 KIR2DL5BA0A0G2JPC4 375 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 DLL1O00548 723 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 TNFRSF1AP19438 455 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 IGF2-ASQ6U949 168 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 KIR2DL5AQ8N109 375 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 SLC25A33Q9BSK2 321 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 OSTCQ9NRP0 149 aa15.23■□□□□ 0.03
CPSF3-201ENST00000238112 A0A1W2PRE2 83 aa15.22■□□□□ 0.03
CPSF3-201ENST00000238112 FRMD6-AS1P0C7T7 363 aa15.22■□□□□ 0.03
CPSF3-201ENST00000238112 CHRNB4P30926 498 aa15.22■□□□□ 0.03
CPSF3-201ENST00000238112 LINC00310P59036 64 aa15.22■□□□□ 0.03
CPSF3-201ENST00000238112 RPL8P62917 257 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms