RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NPBQ8NG41 125 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 FAM213BQ8TBF2 198 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 NARS2Q96I59 477 aaKnown RBP14.52□□□□□ -0.08
VIM-201ENST00000224237 EAF1Q96JC9 268 aaPredicted RBP14.52□□□□□ -0.08
VIM-201ENST00000224237 NPFFO15130 113 aa14.52□□□□□ -0.09
VIM-201ENST00000224237 NDUFA3O95167 84 aa14.52□□□□□ -0.09
VIM-201ENST00000224237 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.09
VIM-201ENST00000224237 RPL27AP46776 148 aaKnown RBP14.52□□□□□ -0.09
VIM-201ENST00000224237 COMPP49747 757 aaPredicted RBP14.52□□□□□ -0.09
VIM-201ENST00000224237 WDR83OSQ9Y284 106 aa14.52□□□□□ -0.09
VIM-201ENST00000224237 SMCO3A2RU48 225 aa14.51□□□□□ -0.09
VIM-201ENST00000224237 MPDU1O75352 247 aa14.51□□□□□ -0.09
VIM-201ENST00000224237 WT1-ASQ06250 92 aa14.51□□□□□ -0.09
VIM-201ENST00000224237 EBI3Q14213 229 aa14.51□□□□□ -0.09
VIM-201ENST00000224237 NPCDR1Q9BY65 106 aa14.51□□□□□ -0.09
VIM-201ENST00000224237 A0A1B0GW64 132 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 FNDC10F2Z333 226 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 C17orf112F2Z3M2 114 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 CD24P25063 80 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 BTN1A1Q13410 526 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 HNF4GQ14541 408 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 C10orf91Q5T1B1 145 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 ZNF709Q8N972 641 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 C1orf159Q96HA4 380 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 AJUBAQ96IF1 538 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 NPVFQ9HCQ7 196 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 TSPAN15O95858 294 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 GATA3P23771 443 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 BRS3P32247 399 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 SUB1P53999 127 aaKnown RBP eCLIP14.5□□□□□ -0.092e-9■■■□□ 17.6
VIM-201ENST00000224237 GNB1P62873 340 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 TREML4Q6UXN2 200 aa14.5□□□□□ -0.09
VIM-201ENST00000224237 CELSR1Q9NYQ6 3014 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 A0A096LNT2 108 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 TRAV20A0A0B4J274 112 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 OR13C7P0DN81 318 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 DEFA5Q01523 94 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 ARSJQ5FYB0 599 aaPredicted RBP14.49□□□□□ -0.09
VIM-201ENST00000224237 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 COMMD1Q8N668 190 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 Q8N6K4 173 aa14.49□□□□□ -0.09
VIM-201ENST00000224237 IGHV1-69DA0A0B4J2H0 117 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 IGLC7A0M8Q6 106 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 SOX15O60248 233 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 IGHV1-69P01742 117 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 FAM106CPP0CH98 169 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 TMEM41BQ5BJD5 291 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 MAPK1IP1LQ8NDC0 245 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 HIF1ANQ9NWT6 349 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 TRAV40A0A0B4J280 105 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 H2AFB1P0C5Y9 115 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 TMEM11P17152 192 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 AKR1C1Q04828 323 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 C5orf64Q2M2E5 130 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 FBLN7Q53RD9 439 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 SVBPQ8N300 66 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 ZNF114Q8NC26 417 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 SRSF12Q8WXF0 261 aaKnown RBP14.48□□□□□ -0.09
VIM-201ENST00000224237 SEC11CQ9BY50 192 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 C7orf69Q9H7B7 122 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 TREM1Q9NP99 234 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 RPRMQ9NS64 109 aa14.48□□□□□ -0.09
VIM-201ENST00000224237 FCN1O00602 326 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 MBP02144 154 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 ELLP55199 621 aaPredicted RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 SSBP2P81877 361 aaPredicted RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 SRSF3P84103 164 aaKnown RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 LOXL1Q08397 574 aaPredicted RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 TEPPQ6URK8 271 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 LINC01356Q8N9X3 169 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 LFNGQ8NES3 379 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 RNASEH2CQ8TDP1 164 aaKnown RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 MBD6Q96DN6 1003 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 P2RX4Q99571 388 aa14.47□□□□□ -0.09
VIM-201ENST00000224237 SRSF8Q9BRL6 282 aaKnown RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 CARHSP1Q9Y2V2 147 aaKnown RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 LSM4Q9Y4Z0 139 aaKnown RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 FASNP49327 2511 aaKnown RBP14.47□□□□□ -0.09
VIM-201ENST00000224237 F8W036 122 aa14.46□□□□□ -0.09
VIM-201ENST00000224237 CD5P06127 495 aa14.46□□□□□ -0.09
VIM-201ENST00000224237 CD69Q07108 199 aa14.46□□□□□ -0.09
VIM-201ENST00000224237 Q5PR19 223 aa14.46□□□□□ -0.09
VIM-201ENST00000224237 CACNG8Q8WXS5 425 aa14.46□□□□□ -0.09
VIM-201ENST00000224237 VSIRQ9H7M9 311 aa14.46□□□□□ -0.09
VIM-201ENST00000224237 IGHV3OR16-10A0A075B7F0 116 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 BTBD17A6NE02 478 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 TEX22C9J3V5 150 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 AGPAT2O15120 278 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 CNIH1O95406 144 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 ACSM6Q6P461 480 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 ATRAIDQ6UW56 229 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.46□□□□□ -0.1
VIM-201ENST00000224237 NKX6-2Q9C056 277 aaPredicted RBP14.46□□□□□ -0.1
VIM-201ENST00000224237 KCNIP2Q9NS61 270 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 C1RLQ9NZP8 487 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 PLXNB1O43157 2135 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 ZANQ9Y493 2812 aa14.46□□□□□ -0.1
VIM-201ENST00000224237 NCBP2LA6PVI3 153 aaKnown RBP14.45□□□□□ -0.1
VIM-201ENST00000224237 HBE1P02100 147 aa14.45□□□□□ -0.1
VIM-201ENST00000224237 GPX4P36969 197 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms