RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 KCNIP3Q9Y2W7 256 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 DMRT1Q9Y5R6 373 aa13.34□□□□□ -0.27
MRPL28-201ENST00000199706 A0A0B4J293 547 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 NAP1L6A6NFF2 107 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 NDUFB8O95169 186 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 TRBV12-3P01733 135 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 REG1AP05451 166 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 SRPXP78539 464 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 SP6Q3SY56 376 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 C19orf35Q6ZS72 473 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 OR9G4Q8NGQ1 327 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 TMEM230Q96A57 120 aa13.33□□□□□ -0.28
MRPL28-201ENST00000199706 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
MRPL28-201ENST00000199706 TRIQKQ629K1 86 aa13.32□□□□□ -0.28
MRPL28-201ENST00000199706 ZNF502Q8TBZ5 544 aa13.32□□□□□ -0.28
MRPL28-201ENST00000199706 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
MRPL28-201ENST00000199706 PLEKHA3Q9HB20 300 aa13.32□□□□□ -0.28
MRPL28-201ENST00000199706 K7EIL1 84 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 LGALS9O00182 355 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 SAP30O75446 220 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 PRB2P02812 416 aaPredicted RBP13.31□□□□□ -0.28
MRPL28-201ENST00000199706 ANXA3P12429 323 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 GPHB5Q86YW7 130 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 LHFPL5Q8TAF8 219 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 MRAPQ8TCY5 172 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 C7orf50Q9BRJ6 194 aaKnown RBP13.31□□□□□ -0.28
MRPL28-201ENST00000199706 HINT2Q9BX68 163 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
MRPL28-201ENST00000199706 ZNF256Q9Y2P7 627 aaPredicted RBP13.31□□□□□ -0.28
MRPL28-201ENST00000199706 IGLV1-51P01701 117 aa13.3□□□□□ -0.28
MRPL28-201ENST00000199706 MECP2P51608 486 aaKnown RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
MRPL28-201ENST00000199706 UBE2MP61081 183 aaKnown RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 SUPT4H1P63272 117 aaKnown RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 TMEM187Q14656 261 aa13.3□□□□□ -0.28
MRPL28-201ENST00000199706 RBMS2Q15434 407 aaKnown RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 IL34Q6ZMJ4 242 aa13.3□□□□□ -0.28
MRPL28-201ENST00000199706 SELENOHQ8IZQ5 122 aaKnown RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 RNASE11Q8TAA1 199 aaKnown RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 SDHCQ99643 169 aaPredicted RBP13.3□□□□□ -0.28
MRPL28-201ENST00000199706 PDCD10Q9BUL8 212 aa13.3□□□□□ -0.28
MRPL28-201ENST00000199706 A0A0B4J2A0 478 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 DUXBA0A1W2PPF3 345 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 WI2-2373I1.2A0A1W2PRP0 233 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 MFSD2BA6NFX1 497 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 A6NHS1 94 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 A8MWP6 167 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 FCGR2BP31994 310 aaPredicted RBP13.29□□□□□ -0.28
MRPL28-201ENST00000199706 ARL3P36405 182 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 MFAP2P55001 183 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 ERHP84090 104 aaKnown RBP13.29□□□□□ -0.28
MRPL28-201ENST00000199706 BAK1Q16611 211 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 TMEM268Q5VZI3 342 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 ZNF57Q68EA5 555 aaPredicted RBP13.29□□□□□ -0.28
MRPL28-201ENST00000199706 PVRIGQ6DKI7 326 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.29□□□□□ -0.28
MRPL28-201ENST00000199706 GAR1Q9NY12 217 aaKnown RBP13.29□□□□□ -0.28
MRPL28-201ENST00000199706 SHPKQ9UHJ6 478 aa13.29□□□□□ -0.28
MRPL28-201ENST00000199706 A0A0G2JRQ6 117 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 INPP1P49441 399 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 SPCS3P61009 180 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 SLC25A24Q6NUK1 477 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 CLEC19AQ6UXS0 136 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 SLC35G3Q8N808 338 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 LRTM2Q8N967 370 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 OR2K2Q8NGT1 345 aa13.28□□□□□ -0.28
MRPL28-201ENST00000199706 BSCL2Q96G97 398 aaPredicted RBP13.28□□□□□ -0.28
MRPL28-201ENST00000199706 PPP5D1E7EU14 171 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 K7EIM0 57 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 CORTO00230 105 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 IFNA17P01571 189 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 IL7P13232 177 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 AKR1C4P17516 323 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 CNPY1Q3B7I2 92 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 NMSQ5H8A3 153 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 Q6ZRM9 215 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 LGI3Q8N145 548 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 C21orf62Q9NYP8 219 aa13.27□□□□□ -0.29
MRPL28-201ENST00000199706 CENPXA8MT69 81 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 NDUFB6O95139 128 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 HLA-AP01891 365 aaKnown RBP13.26□□□□□ -0.29
MRPL28-201ENST00000199706 CLEC3BP05452 202 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 CSN3P07498 182 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 BSXQ3C1V8 233 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 FAM106AQ4KMX7 169 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 CENPSQ8N2Z9 138 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 SCARB1Q8WTV0 552 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 TXN2Q99757 166 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 CCDC32Q9BV29 185 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 CACNG5Q9UF02 275 aa13.26□□□□□ -0.29
MRPL28-201ENST00000199706 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
MRPL28-201ENST00000199706 I3L2K1 104 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 TGOLN2O43493 480 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 SULT1A3P0DMM9 295 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms