RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Kcnk15B2RVL1 343 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 LipiF6YQT7 476 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Polr2gP62488 172 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Psg19Q4KL31 475 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Asb5Q9D1A4 329 aa13.52□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fgf7P36363 194 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ier3P46694 153 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 F7P70375 446 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 AU041133A0A0J9YVH3 498 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tmem42Q9CR22 157 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fxyd4Q9D2W0 88 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Xcr1Q9R0M1 322 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Kcne4Q9WTW3 170 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cabin1G3X8Q1 2187 aaKnown RBP13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ldlrad3A2AR95 345 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr1406E9Q8X1 310 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm9772F6XPD8 135 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mrgprb2Q3KNA1 338 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 MidnQ3TPJ7 465 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Klk1b24Q61754 263 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tox3Q80W03 575 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gpr84Q8CIM5 396 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Uqcc1Q9CWU6 295 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Arl13aQ9D416 372 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Enpp5Q9EQG7 477 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Zfp979A2A799 407 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 LexmA2AVQ5 414 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Rhox7bA6PW38 321 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Wdfy1E9Q4P1 410 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Shisa3Q3UPR0 238 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Hand1Q64279 216 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Aadacl4Q8BM81 407 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr262Q8VFV8 312 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr1444Q8VFX2 319 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 SdhdQ9CXV1 159 aa13.51□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Aadacl4B1AVU5 407 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Nxpe5E0CX47 564 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr920E9Q413 310 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20821J3QPJ2 227 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Prss12O08762 761 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 StumQ0VBF8 141 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 1700009N14RikQ14AA6 216 aaKnown RBP13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tgfbr1Q64729 503 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 SprnQ8BWU1 147 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Icam4Q9ERM2 262 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Elovl1Q9JLJ5 279 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 A630073D07RikE9PWS6 100 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr624F8VQI7 308 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Oprk1P33534 380 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Spem1Q5F289 310 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Zfp119bQ8K0G9 543 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Adam11Q9R1V4 773 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 TspoP50637 169 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 FusP56959 518 aaKnown RBP13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm9837Q8C607 126 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr362Q8VGV7 317 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Anapc16Q9CPV2 110 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Atp6v1fQ9D1K2 119 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ighv5-15A0A0A6YWC7 117 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vmn1r160E9Q346 307 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vmn1r123L7N270 307 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Il2raP01590 268 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Pmp2P24526 132 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm21943Q5FWD5 227 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm10334Q792Y8 246 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 ClmQ7TSN2 230 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 9030612E09RikQ8CE20 140 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Phf13Q8K2W6 296 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Rpp21Q8R040 150 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Dtx2Q8R3P2 619 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr1457Q8VFK3 317 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Nicn1Q9CQM0 213 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mnx1Q9QZW9 404 aa13.5□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Lgals1P16045 135 aaKnown RBP13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Slc46a1Q6PEM8 459 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 C030005K15RikQ8BQN9 115 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Dhrs7cQ8CHS7 311 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Plrg1Q922V4 513 aaKnown RBP13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 1700013G24RikQ9DAC6 286 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr685A0A1L1SVG7 331 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 E030025P04RikA2A6V5 185 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cldn34c4A2ANA3 212 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 SelenohQ3UQA7 116 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Zfp772Q3UQL6 416 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fam78bQ8BQN5 261 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mob3aQ8BSU7 217 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vmn1r4Q8R2D3 297 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cml1Q9JIZ0 222 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm10840Q3V2K9 103 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Pnpla3Q91WW7 413 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Q9D7E4 109 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cldn15Q9Z0S5 227 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mettl23A2AA28 253 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cd200O54901 278 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Siva1O54926 175 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ifna6P07350 189 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ptbp1P17225 527 aaKnown RBP13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Lyz1P17897 148 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 HrasQ61411 189 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Megf9Q8BH27 600 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms