RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OR5B3Q8NH48 314 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 FLYWCH2Q96CP2 140 aaKnown RBP16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 GGTLC1Q9BX51 225 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 RALYQ9UKM9 306 aaKnown RBP16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 ATRXP46100 2492 aa16.03■□□□□ 0.16
PCDHB11-202ENST00000624887 PSMB3P49720 205 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 CD81P60033 236 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 SNRPEP62304 92 aaKnown RBP16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 ARSJQ5FYB0 599 aaPredicted RBP16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 PDPNQ86YL7 162 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 OR4C13Q8NGP0 309 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 RAB1CQ92928 201 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 C1orf159Q96HA4 380 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 MANBALQ9NQG1 85 aa16.02■□□□□ 0.16
PCDHB11-202ENST00000624887 IGHV2-70P01814 119 aa16.02■□□□□ 0.15
PCDHB11-202ENST00000624887 DIAPH2-AS1Q14236 149 aa16.02■□□□□ 0.15
PCDHB11-202ENST00000624887 ZNF841Q6ZN19 808 aa16.02■□□□□ 0.15
PCDHB11-202ENST00000624887 TNCP24821 2201 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 FNDC10F2Z333 226 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 NDUFS6O75380 124 aaKnown RBP16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 YIF1AO95070 293 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 OR2C1O95371 312 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 FABP1P07148 127 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 DEFA4P12838 97 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 ATP5IP56385 69 aaPredicted RBP16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 TMEM249Q2WGJ8 235 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 GCSAMLQ5JQS6 135 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 MALSU1Q96EH3 234 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 PCGF1Q9BSM1 259 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 TMEM133Q9H2Q1 129 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 PXMP4Q9Y6I8 212 aa16.01■□□□□ 0.15
PCDHB11-202ENST00000624887 B4DEV8 164 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 OPN1MWP04001 364 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 OPN1MW2P0DN77 364 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 OPN1MW3P0DN78 364 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 MAS1LP35410 378 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 PNRC1Q12796 327 aaPredicted RBP16■□□□□ 0.15
PCDHB11-202ENST00000624887 FAM24BQ8N5W8 94 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 NANPQ8TBE9 248 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 YPEL4Q96NS1 127 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 KCNIP2Q9NS61 270 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 BSXQ3C1V8 233 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 TEPPQ6URK8 271 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 TGIF2LXQ8IUE1 241 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 NEIL1Q96FI4 390 aaPredicted RBP16■□□□□ 0.15
PCDHB11-202ENST00000624887 GSN-AS1Q9NRJ2 163 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 WASHC3Q9Y3C0 194 aa16■□□□□ 0.15
PCDHB11-202ENST00000624887 LINC00587B1AMM8 73 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 TMEM250H0YL14 139 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 USF1P22415 310 aaPredicted RBP15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 MIC13Q5XKP0 118 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 LINC00469Q8N7U9 141 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 OR4A5Q8NH83 315 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 VSTM2AQ8TAG5 236 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 TNFRSF14Q92956 283 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 OR51M1Q9H341 326 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 RELNP78509 3460 aa15.99■□□□□ 0.15
PCDHB11-202ENST00000624887 A0A1W2PPV4 95 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 IGHV2-5P01817 119 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 RAB5AP20339 215 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 IL3RAP26951 378 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 RPL8P62917 257 aaKnown RBP15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 C2orf83Q53S99 150 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 WDR25Q64LD2 544 aaPredicted RBP15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 TMEM167AQ8TBQ9 72 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 GATAD1Q8WUU5 269 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 SDF2L1Q9HCN8 221 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 SIRT7Q9NRC8 400 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 NDUFA4L2Q9NRX3 87 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 ZNF727A8MUV8 499 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 S100A6P06703 90 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 MC5RP33032 325 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 RAB31Q13636 194 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 OR1L8Q8NGR8 309 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 COMMD5Q9GZQ3 224 aa15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 PATZ1Q9HBE1 687 aaKnown RBP15.98■□□□□ 0.15
PCDHB11-202ENST00000624887 NBASA2RRP1 2371 aa15.97■□□□□ 0.15
PCDHB11-202ENST00000624887 CXorf65A6NEN9 183 aa15.97■□□□□ 0.15
PCDHB11-202ENST00000624887 INS-IGF2F8WCM5 200 aa15.97■□□□□ 0.15
PCDHB11-202ENST00000624887 RAB1BQ9H0U4 201 aa15.97■□□□□ 0.15
PCDHB11-202ENST00000624887 IGLV2-23P01705 113 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 RNASE2P10153 161 aaKnown RBP15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 S100PP25815 95 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 SSMEM1Q8WWF3 244 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 CBLN4Q9NTU7 201 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 ABCA4P78363 2273 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 IGHV2-26A0A0B4J1V2 119 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 hCG_1809904A0A1W2PP81 198 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 A0A1W2PR64 198 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 A0A1W2PRV1 198 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 PAGE4O60829 102 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 RBP4P02753 201 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 RPL29P47914 159 aaKnown RBP15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 OR10W1Q8NGF6 305 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 ITPR1Q14643 2758 aa15.96■□□□□ 0.15
PCDHB11-202ENST00000624887 IGLV1-47P01700 117 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 STPG3Q8N7X2 389 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 OR4F5Q8NH21 305 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 C8orf46Q8TAG6 207 aa15.95■□□□□ 0.14
PCDHB11-202ENST00000624887 OR4F4Q96R69 305 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms