RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SPCS3P61009 180 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 PRCDQ00LT1 54 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 OR4D5Q8NGN0 318 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 ABHD5Q8WTS1 349 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 C2orf50Q96LR7 162 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 SRSF8Q9BRL6 282 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 FAM103A1Q9BTL3 118 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 PDCD10Q9BUL8 212 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 SERTAD4Q9NUC0 356 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 HSPB7Q9UBY9 170 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 TEX22C9J3V5 150 aa15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 IFNA17P01571 189 aa15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 TRAPPC2P0DI81 140 aa15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 TRAPPC2BP0DI82 140 aa15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 VDAC2P45880 294 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 FCN2Q15485 313 aa15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 TMEM95Q3KNT9 176 aa15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 FYTTD1Q96QD9 318 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-221ENST00000622702 CXCL3P19876 107 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 H2BFSP57053 126 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 TNFRSF9Q07011 255 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 IL15RAQ13261 267 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 AKIRIN2Q53H80 203 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 C19orf54Q5BKX5 351 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 ARSJQ5FYB0 599 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 CXorf66Q5JRM2 361 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 HSD17B13Q7Z5P4 300 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 OR11H7Q8NGC8 314 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 TMEM68Q96MH6 324 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 RNF114Q9Y508 228 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 IGLC7A0M8Q6 106 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 SIX6O95475 246 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 ID3Q02535 119 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 TMEM267Q0VDI3 215 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 ASPHD1Q5U4P2 390 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 STPG2Q8N412 459 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 LFNGQ8NES3 379 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 HINT2Q9BX68 163 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 GSKIPQ9P0R6 139 aa15.59■□□□□ 0.09
PDLIM2-221ENST00000622702 TRAV41A0A0B4J266 112 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 A0A1W2PN81 502 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 INS-IGF2F8WCM5 200 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 CHRNA7P36544 502 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 NKX2-1P43699 371 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 CYCSP99999 105 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 SRSF4Q08170 494 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 NOL4LQ96MY1 436 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 ZNF747Q9BV97 191 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 NMES1Q9C002 83 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 WNT10AQ9GZT5 417 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 PLEKHA3Q9HB20 300 aa15.58■□□□□ 0.08
PDLIM2-221ENST00000622702 HMX3A6NHT5 357 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 G3V318 75 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 HAX1O00165 279 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 ECSCRQ19T08 205 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 UNQ5815/PRO19632Q6UWF5 114 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 MRPL41Q8IXM3 137 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 OR10W1Q8NGF6 305 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 GON7Q9BXV9 100 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 LINC00527Q9UJ94 153 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 WSB1Q9Y6I7 421 aa15.57■□□□□ 0.08
PDLIM2-221ENST00000622702 MED6O75586 246 aa15.56■□□□□ 0.08
PDLIM2-221ENST00000622702 NXPH3O95157 252 aa15.56■□□□□ 0.08
PDLIM2-221ENST00000622702 PROK1P58294 105 aa15.56■□□□□ 0.08
PDLIM2-221ENST00000622702 CFHR3Q02985 330 aa15.56■□□□□ 0.08
PDLIM2-221ENST00000622702 WT1-ASQ06250 92 aa15.56■□□□□ 0.08
PDLIM2-221ENST00000622702 SPINK9Q5DT21 86 aa15.56■□□□□ 0.08
PDLIM2-221ENST00000622702 NPIPB5A8MRT5 1133 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 CEBPZOSA8MTT3 80 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 MBPP02686 304 aaPredicted RBP15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 APELAP0DMC3 54 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 AREGP15514 252 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 PPIFP30405 207 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 HOXA1P49639 335 aaPredicted RBP15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 TTC9CQ8N5M4 171 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 WFDC12Q8WWY7 111 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 ASB13Q8WXK3 278 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 RBKSQ9H477 322 aa15.55■□□□□ 0.08
PDLIM2-221ENST00000622702 SYNGR2O43760 224 aa15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 CRYGCP07315 174 aa15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 OR13C7P0DN81 318 aa15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 OR2C3Q8N628 320 aa15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 FAM110DQ8TAY7 271 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 DTD1Q8TEA8 209 aa15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 ZNF436Q9C0F3 470 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 ENY2Q9NPA8 101 aa15.54■□□□□ 0.08
PDLIM2-221ENST00000622702 A0A1B0GVG6 124 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 SCGB1D2O95969 90 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 CTRB1P17538 263 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 PSMB6P28072 239 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 POLR2GP62487 172 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 ERHP84090 104 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 CTRB2Q6GPI1 263 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 WDR89Q96FK6 387 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 MAGT1Q9H0U3 335 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 ZFP57Q9NU63 452 aa15.53■□□□□ 0.08
PDLIM2-221ENST00000622702 FBXO24O75426 580 aa15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 LY86O95711 162 aa15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 GIPP09681 153 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 SLC35B1P78383 322 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms