RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 HLA-DRB5Q30154 266 aa16.48■□□□□ 0.23
SDHA-220ENST00000617470 TGIF2LXQ8IUE1 241 aa16.48■□□□□ 0.23
SDHA-220ENST00000617470 CLEC7AQ9BXN2 247 aa16.48■□□□□ 0.23
SDHA-220ENST00000617470 UNKLQ9H9P5 680 aaKnown RBP16.48■□□□□ 0.23
SDHA-220ENST00000617470 FBXO7Q9Y3I1 522 aa16.48■□□□□ 0.23
SDHA-220ENST00000617470 TLN2Q9Y4G6 2542 aa16.48■□□□□ 0.23
SDHA-220ENST00000617470 AGPAT2O15120 278 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 OR8U8P0C7N1 319 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 TMEM231Q9H6L2 316 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 BET1LQ9NYM9 111 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 FAM96BQ9Y3D0 163 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 UBE2L5PA0A1B0GUS4 154 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 RRHO14718 337 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 SCO1O75880 301 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 VWC2Q2TAL6 325 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 SLC25A24Q6NUK1 477 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 PDPNQ86YL7 162 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 OR10P1Q8NGE3 313 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 SCGB1C1Q8TD33 95 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 SCRT1Q9BWW7 348 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 HEYLQ9NQ87 328 aaPredicted RBP16.47■□□□□ 0.23
SDHA-220ENST00000617470 OR51B2Q9Y5P1 312 aa16.47■□□□□ 0.23
SDHA-220ENST00000617470 LY86O95711 162 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 ATP6V1FQ16864 119 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 HCP5Q6MZN7 132 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 Q71RC1 249 aaPredicted RBP16.46■□□□□ 0.23
SDHA-220ENST00000617470 BEND2Q8NDZ0 799 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 TAF15Q92804 592 aaKnown RBP eCLIP16.46■□□□□ 0.23
SDHA-220ENST00000617470 FLYWCH2Q96CP2 140 aaKnown RBP16.46■□□□□ 0.23
SDHA-220ENST00000617470 TMEM147Q9BVK8 224 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 PRNDQ9UKY0 176 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 HIVEP1P15822 2718 aa16.46■□□□□ 0.23
SDHA-220ENST00000617470 CENPVL3A0A0U1RRI6 287 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 TMEM218A2RU14 115 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 PRSS46E5RG02 174 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 BUB1B-PAK6H3BSN5 160 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 IGLV2-23P01705 113 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 PRRX1P54821 245 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 OR4P4Q8NGL7 312 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 OR4C13Q8NGP0 309 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 PINX1Q96BK5 328 aaKnown RBP16.46■□□□□ 0.22
SDHA-220ENST00000617470 RITA1Q96K30 269 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 PSMG3Q9BT73 122 aaPredicted RBP16.46■□□□□ 0.22
SDHA-220ENST00000617470 HIPK2Q9H2X6 1198 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 WASHC3Q9Y3C0 194 aa16.46■□□□□ 0.22
SDHA-220ENST00000617470 KBTBD11O94819 623 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 TSPAN15O95858 294 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 IGHV4-38-2P0DP08 117 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 MDKP21741 143 aaPredicted RBP16.45■□□□□ 0.22
SDHA-220ENST00000617470 IL3RAP26951 378 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 SNCAP37840 140 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 LDLRAD2Q5SZI1 272 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 SPSB3Q6PJ21 355 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 IL17RELQ6ZVW7 336 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 GSX1Q9H4S2 264 aaPredicted RBP16.45■□□□□ 0.22
SDHA-220ENST00000617470 ZNF257Q9Y2Q1 563 aa16.45■□□□□ 0.22
SDHA-220ENST00000617470 TNCP24821 2201 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 C9JQL5 133 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 IFNA10P01566 189 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 CD5P06127 495 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 ADCYAP1P18509 176 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 HOXA1P49639 335 aaPredicted RBP16.44■□□□□ 0.22
SDHA-220ENST00000617470 UBE2E1P51965 193 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 NARS2Q96I59 477 aaKnown RBP16.44■□□□□ 0.22
SDHA-220ENST00000617470 AIFM2Q9BRQ8 373 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 VSIRQ9H7M9 311 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 UQCC1Q9NVA1 299 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 TMA7Q9Y2S6 64 aaKnown RBP16.44■□□□□ 0.22
SDHA-220ENST00000617470 TEX50A0A1B0GTY4 177 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 LY6LH3BQJ8 138 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 LGALS4P56470 323 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 FAM120AOSQ5T036 256 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 AKR1C8PQ5T2L2 129 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 RUSC1-AS1Q66K80 236 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 BRD3OSQ6XYD6 125 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 CENPVQ7Z7K6 275 aaPredicted RBP16.44■□□□□ 0.22
SDHA-220ENST00000617470 OR11H6Q8NGC7 330 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 NANPQ8TBE9 248 aa16.44■□□□□ 0.22
SDHA-220ENST00000617470 MAST4O15021 2626 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 IGHV3-72A0A0B4J1Y9 119 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 OPN1MWP04001 364 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 OPN1MW2P0DN77 364 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 OPN1MW3P0DN78 364 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 CCL20P78556 96 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 PRCDQ00LT1 54 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 KLF17Q5JT82 389 aaPredicted RBP16.43■□□□□ 0.22
SDHA-220ENST00000617470 CLCC1Q96S66 551 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 MS4A7Q9GZW8 240 aaPredicted RBP16.43■□□□□ 0.22
SDHA-220ENST00000617470 RPRMQ9NS64 109 aa16.43■□□□□ 0.22
SDHA-220ENST00000617470 IGHV1-69DA0A0B4J2H0 117 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 IGHV1-69P01742 117 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 M6PRP20645 277 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 MC5RP33032 325 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 IGHV1-3A0A0C4DH29 117 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 A0A1B0GV50 99 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 RAB13P51153 203 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 RPP30P78346 268 aaKnown RBP16.42■□□□□ 0.22
SDHA-220ENST00000617470 HNF4GQ14541 408 aa16.42■□□□□ 0.22
SDHA-220ENST00000617470 MRGPRG-AS1Q2M3A8 158 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms