RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SDHCQ99643 169 aaPredicted RBP8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 PRRC2CQ9Y520 2896 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 GBF1Q92538 1859 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 TANC1Q9C0D5 1861 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 BMPR1BO00238 502 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 CD74P04233 296 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 EFNA4P52798 201 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 HIST1H3AP68431 136 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 SP5Q6BEB4 398 aaPredicted RBP8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF705AQ6ZN79 300 aaPredicted RBP8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 BPIFA4PQ86YQ2 179 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 SSC4DQ8WTU2 575 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 SH3BGRL3Q9H299 93 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 TMEM133Q9H2Q1 129 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 VAX2Q9UIW0 290 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 FBXL7Q9UJT9 491 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 FOXA2Q9Y261 457 aaPredicted RBP8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 CORTO00230 105 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 TCAPO15273 167 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 NDUFB4O95168 129 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 S100A8P05109 93 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 COL8A2P25067 703 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 SELENOTP62341 195 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 AWAT1Q58HT5 328 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 TEX29Q8N6K0 151 aa8.46□□□□□ -1.05
SMARCA1-205ENST00000617310 E7EQL1 145 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 TSTD3H0UI37 97 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 CXorf1O96002 111 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 CFDP00746 253 aaPredicted RBP8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 ZNF735P0CB33 412 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 MMP9P14780 707 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 NOL4LQ96MY1 436 aaPredicted RBP8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 GOLT1BQ9Y3E0 138 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 A0A0A6YYD4 124 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 MEF2CQ06413 473 aaPredicted RBP8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 ZNF273Q14593 569 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 C2orf68Q2NKX9 166 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 TMEM78Q5T7P6 136 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 CBLN2Q8IUK8 224 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
SMARCA1-205ENST00000617310 RAMP3O60896 148 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 AMY1AP04745 511 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 CLEC19AQ6UXS0 136 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 COLCA1Q6ZS62 124 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 PPP1R27Q86WC6 154 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 H1FOOQ8IZA3 346 aaPredicted RBP8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 ZNF586Q9NXT0 402 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 TM4SF5O14894 197 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 MLNRO43193 412 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 PITX3O75364 302 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 SAA1P0DJI8 122 aaPredicted RBP8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 NPPCP23582 126 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 LINC00205P59089 165 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 WDR25Q64LD2 544 aaPredicted RBP8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 OSR1Q8TAX0 266 aaPredicted RBP8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 GFI1Q99684 422 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 NIT2Q9NQR4 276 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 RNF223E7ERA6 249 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 HIST1H1EP10412 219 aaKnown RBP8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 ID1P41134 155 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 SPANXN1Q5VSR9 72 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 TUBD1Q9UJT1 453 aa8.45□□□□□ -1.06
SMARCA1-205ENST00000617310 MORN2Q502X0 79 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 LYPD2Q6UXB3 125 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 DNAJC4Q9NNZ3 241 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 PNRC2Q9NPJ4 139 aaKnown RBP8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 LYRM2Q9NU23 88 aaPredicted RBP8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 TSC2P49815 1807 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 CCL1P22362 96 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 EFNB1P98172 346 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 ARPC1AQ92747 370 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 NABP2Q9BQ15 211 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 MANBALQ9NQG1 85 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 A0A1W2PS18 150 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 TMEM178BH3BS89 294 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 NTF4P34130 210 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 UCP3P55916 312 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 OR1L6Q8NGR2 347 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 SRSF12Q8WXF0 261 aaKnown RBP8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 TCEAL7Q9BRU2 100 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 SLC25A33Q9BSK2 321 aa8.44□□□□□ -1.06
SMARCA1-205ENST00000617310 A0A1W2PNU3 283 aaPredicted RBP8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 TMEM218A2RU14 115 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 J3QRE1 110 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 UCP1P25874 307 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 SERF2P84101 59 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 C21orf62Q9NYP8 219 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 FAM215AQ9Y5M1 114 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 MFAP2P55001 183 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 ZP1P60852 638 aa8.43□□□□□ -1.06
SMARCA1-205ENST00000617310 DLK1P80370 383 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms