RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MYOD1P15172 320 aa14.17□□□□□ -0.14
SHKBP1-224ENST00000600718 SAA4P35542 130 aa14.17□□□□□ -0.14
SHKBP1-224ENST00000600718 ATP5SQ99766 215 aa14.17□□□□□ -0.14
SHKBP1-224ENST00000600718 ZNF430Q9H8G1 570 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-224ENST00000600718 HIF1ANQ9NWT6 349 aa14.17□□□□□ -0.14
SHKBP1-224ENST00000600718 FBN2P35556 2912 aa14.17□□□□□ -0.14
SHKBP1-224ENST00000600718 ARL16Q0P5N6 197 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 HAPLN4Q86UW8 402 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 MMD2Q8IY49 270 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 OR2T10Q8NGZ9 312 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 AJUBAQ96IF1 538 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 GINS3Q9BRX5 216 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 HINT2Q9BX68 163 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 C7orf69Q9H7B7 122 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 PLEKHA3Q9HB20 300 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 NDUFA4L2Q9NRX3 87 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 SIGLEC9Q9Y336 463 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 IGHV1-69DA0A0B4J2H0 117 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 RNF223E7ERA6 249 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 IFNA10P01566 189 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 IGKV1D-33P01593 117 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 IGKV1-33P01594 117 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 IGHV1-69P01742 117 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 CNTFRP26992 372 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 MAS1LP35410 378 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 PRSS8Q16651 343 aa14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 EAF1Q96JC9 268 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 METTL1Q9UBP6 276 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-224ENST00000600718 C15orf62A8K5M9 175 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 PMS2P5A8MQ11 134 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 IFNA4P05014 189 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 ADCYAP1P18509 176 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 EBI3Q14213 229 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 ATP6V1FQ16864 119 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 MRGPRG-AS1Q2M3A8 158 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 OR8G2PQ6IF36 304 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 THNSL2Q86YJ6 484 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 OR10P1Q8NGE3 313 aa14.15□□□□□ -0.14
SHKBP1-224ENST00000600718 INS-IGF2F8WCM5 200 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 SNAPINO95295 136 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 OPN1MWP04001 364 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 SNRNP70P08621 437 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 OPN1MW2P0DN77 364 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 OPN1MW3P0DN78 364 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 PAX6P26367 422 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 BRS3P32247 399 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 MEOX2P50222 304 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 F2RL1P55085 397 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 ATP5IP56385 69 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 SLC38A11Q08AI6 406 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 GUCA2BQ16661 112 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 PPP1R27Q86WC6 154 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 LILRB2Q8N423 598 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 NPBQ8NG41 125 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 TMED6Q8WW62 240 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 PINX1Q96BK5 328 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 TPSG1Q9NRR2 321 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 TENM4Q6N022 2769 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 CRYBG3Q68DQ2 2970 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 SPG11Q96JI7 2443 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 A0A1W2PN81 502 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 RRHO14718 337 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 IFNA5P01569 189 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 OR8U8P0C7N1 319 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 CHRNA7P36544 502 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 RAB11AP62491 216 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 HES1Q14469 280 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 TMEM88Q6PEY1 159 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 Q96MF0 132 aa14.14□□□□□ -0.15
SHKBP1-224ENST00000600718 J3QLI3 93 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 NBR2O15453 112 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 ACTL6BO94805 426 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 SEC11BP0C7V7 166 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 PJVKQ0ZLH3 352 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 HNF4GQ14541 408 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 MMDQ15546 238 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 KRTAP1-3Q8IUG1 177 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 FBXL15Q9H469 300 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 KIAA1456Q9P272 454 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 FBXO24O75426 580 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 NDUFA3O95167 84 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 FAM106CPP0CH98 169 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 CD24P25063 80 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 BLOC1S1P78537 153 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 ERHP84090 104 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 SLC24A4Q8NFF2 622 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 SEC11CQ9BY50 192 aa14.13□□□□□ -0.15
SHKBP1-224ENST00000600718 TRAV40A0A0B4J280 105 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 SPP1P10451 314 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 NPY1RP25929 384 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 PLGLAQ15195 96 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 ETV3LQ6ZN32 361 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 CBLN2Q8IUK8 224 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 Q8N6K4 173 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 HSD17B11Q8NBQ5 300 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 RNF141Q8WVD5 230 aa14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 PARD6GQ9BYG4 376 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-224ENST00000600718 TGFAP01135 160 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 TNXAQ16473 311 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms