RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 LYG2Q86SG7 212 aa10.58□□□□□ -0.72
SCAF1-203ENST00000598359 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
SCAF1-203ENST00000598359 C12orf45Q8N5I9 185 aaPredicted RBP10.58□□□□□ -0.72
SCAF1-203ENST00000598359 ADTRPQ96IZ2 230 aa10.58□□□□□ -0.72
SCAF1-203ENST00000598359 SCGB3A2Q96PL1 93 aa10.58□□□□□ -0.72
SCAF1-203ENST00000598359 PHB2Q99623 299 aa10.58□□□□□ -0.72
SCAF1-203ENST00000598359 ASCL2Q99929 193 aa10.58□□□□□ -0.72
SCAF1-203ENST00000598359 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 C13orf42A0A1B0GVH6 325 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 CTXN2P0C2S0 81 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 SAA1P0DJI8 122 aaPredicted RBP10.57□□□□□ -0.72
SCAF1-203ENST00000598359 DHRS2Q13268 280 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 Q5BKY6 102 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 C10orf55Q5SWW7 151 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 AADACL3Q5VUY0 350 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 ACSM6Q6P461 480 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 KCTD9Q7L273 389 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 ZNF429Q86V71 674 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 ZNF430Q9H8G1 570 aaPredicted RBP10.57□□□□□ -0.72
SCAF1-203ENST00000598359 COA4Q9NYJ1 87 aa10.57□□□□□ -0.72
SCAF1-203ENST00000598359 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 C9orf170A2RU37 121 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 PRH1P02810 166 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 AADACP22760 399 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 INSL3P51460 131 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 ARPC4P59998 168 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 TMED4Q7Z7H5 227 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 OR2T35Q8NGX2 323 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 OSR1Q8TAX0 266 aaPredicted RBP10.56□□□□□ -0.72
SCAF1-203ENST00000598359 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 MITD1Q8WV92 249 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 TCTEX1D2Q8WW35 142 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 SRSF12Q8WXF0 261 aaKnown RBP10.56□□□□□ -0.72
SCAF1-203ENST00000598359 EHFQ9NZC4 300 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
SCAF1-203ENST00000598359 H3BUA1 57 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 MPPED1O15442 326 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 TNFSF12O43508 249 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 HLA-AP01891 365 aaKnown RBP10.55□□□□□ -0.72
SCAF1-203ENST00000598359 H2BFSP57053 126 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 BRWD1-AS2P59051 145 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 EIF4EBP1Q13541 118 aaPredicted RBP10.55□□□□□ -0.72
SCAF1-203ENST00000598359 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 C19orf35Q6ZS72 473 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
SCAF1-203ENST00000598359 SECTM1Q8WVN6 248 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 C5orf66Q9H5L9 145 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 CCL28Q9NRJ3 127 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
SCAF1-203ENST00000598359 DBX1A6NMT0 343 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 GOSR2O14653 212 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 SLC22A5O76082 557 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 FCGR2CP31995 323 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 TSPAN5P62079 268 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 NDUFA5Q16718 116 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 DHRS11Q6UWP2 260 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 RSRP1Q9BUV0 290 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 HSPB11Q9Y547 144 aa10.54□□□□□ -0.72
SCAF1-203ENST00000598359 A0A0G2JLM5 398 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 SFT2D2O95562 160 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-203ENST00000598359 OR9G9P0C7N8 305 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 MYOD1P15172 320 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 SYNJ2BPP57105 145 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 FXYD4P59646 89 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 SSX9Q7RTT3 188 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 UXS1Q8NBZ7 420 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 OR4S2Q8NH73 311 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 TMEM68Q96MH6 324 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 OR4C12Q96R67 309 aa10.53□□□□□ -0.72
SCAF1-203ENST00000598359 HSD17B10Q99714 261 aaKnown RBP10.53□□□□□ -0.72
SCAF1-203ENST00000598359 RTBDNQ9BSG5 229 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-203ENST00000598359 E7EUB6 86 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 ATP6V1G1O75348 118 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 ACTL6BO94805 426 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 PPYP01298 95 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 GP9P14770 177 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 UCP3P55916 312 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 RHOGP84095 191 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 KLF5Q13887 457 aaPredicted RBP10.52□□□□□ -0.73
SCAF1-203ENST00000598359 LGALSLQ3ZCW2 172 aaPredicted RBP10.52□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF343Q6P1L6 599 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 ZNF767PQ75MW2 155 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 MMD2Q8IY49 270 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 WWC2-AS2Q96NR7 200 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 SLC5A7Q9GZV3 580 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 FXYD6Q9H0Q3 95 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 PEF1Q9UBV8 284 aaKnown RBP10.52□□□□□ -0.73
SCAF1-203ENST00000598359 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 TNCP24821 2201 aa10.52□□□□□ -0.73
SCAF1-203ENST00000598359 A0A1B0GW64 132 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 TEX22C9J3V5 150 aa10.51□□□□□ -0.73
SCAF1-203ENST00000598359 KBTBD11O94819 623 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms