RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 UBE2E2Q96LR5 201 aa5.77□□□□□ -1.49
VMP1-213ENST00000591877 CMSS1Q9BQ75 279 aaKnown RBP5.77□□□□□ -1.49
VMP1-213ENST00000591877 MCRIP2Q9BUT9 160 aaKnown RBP5.77□□□□□ -1.49
VMP1-213ENST00000591877 SLIRPQ9GZT3 109 aaKnown RBP5.77□□□□□ -1.49
VMP1-213ENST00000591877 TOLLIPQ9H0E2 274 aa5.77□□□□□ -1.49
VMP1-213ENST00000591877 C12orf4Q9NQ89 552 aa5.77□□□□□ -1.49
VMP1-213ENST00000591877 PARP11Q9NR21 331 aa5.77□□□□□ -1.49
VMP1-213ENST00000591877 GAB2Q9UQC2 676 aa5.77□□□□□ -1.49
VMP1-213ENST00000591877 IGHV4OR15-8A0A075B7B6 117 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 TRDV1A0A1B0GX56 115 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 A0A1W2PS18 150 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 OR5H14A6NHG9 310 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 IFITM5A6NNB3 132 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 TRDCB7Z8K6 153 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 MFNGO00587 321 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 IGKV1-16P04430 117 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 FCGR3AP08637 254 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 GSTT2P0CG29 244 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 GSTT2BP0CG30 244 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 OR5H8P0DN80 308 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 RAB9AP51151 201 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 RAB25P57735 213 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 GNB1P62873 340 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 RUNX1Q01196 453 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 PSG5Q15238 335 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 ZNF660Q6AZW8 331 aaPredicted RBP5.76□□□□□ -1.49
VMP1-213ENST00000591877 OR11H1Q8NG94 326 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 OR10R2Q8NGX6 335 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 CASTOR1Q8WTX7 329 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 PHLDA1Q8WV24 401 aaPredicted RBP5.76□□□□□ -1.49
VMP1-213ENST00000591877 OR5B12Q96R08 314 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 KRTAP1-5Q9BYS1 174 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 GPR61Q9BZJ8 451 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 NXF2Q9GZY0 626 aaKnown RBP5.76□□□□□ -1.49
VMP1-213ENST00000591877 ALX4Q9H161 411 aaPredicted RBP5.76□□□□□ -1.49
VMP1-213ENST00000591877 TXNL4BQ9NX01 149 aaKnown RBP5.76□□□□□ -1.49
VMP1-213ENST00000591877 RDH8Q9NYR8 311 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 ELF5Q9UKW6 265 aaPredicted RBP5.76□□□□□ -1.49
VMP1-213ENST00000591877 RAB22AQ9UL26 194 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 MGAT4AQ9UM21 535 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 WASHC3Q9Y3C0 194 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 NUBP2Q9Y5Y2 271 aa5.76□□□□□ -1.49
VMP1-213ENST00000591877 TENM3Q9P273 2699 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 A0A075B6Q4 140 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 IGKV1D-8A0A087WSZ0 117 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 C5orf51A6NDU8 294 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 H7C2Y5 167 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 FABP7O15540 132 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 RBBP9O75884 186 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 GNB3P16520 340 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 RAB3BP20337 219 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 TGFBR1P36897 503 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 PSMD7P51665 324 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 ECSCRQ19T08 205 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 PHLDA2Q53GA4 152 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 C9orf66Q5T8R8 295 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 C22orf42Q6IC83 251 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 C9orf47Q6ZRZ4 202 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 OR4A4PQ8NGN8 299 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 OR1N2Q8NGR9 330 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 MCFD2Q8NI22 146 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 S100ZQ8WXG8 99 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 MAFIPQ8WZ33 124 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 RAB3CQ96E17 227 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 CLCC1Q96S66 551 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 RNF5Q99942 180 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 FAM103A1Q9BTL3 118 aaKnown RBP5.75□□□□□ -1.49
VMP1-213ENST00000591877 CABLES2Q9BTV7 478 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 RNF167Q9H6Y7 350 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 PALMDQ9NP74 551 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 METTL1Q9UBP6 276 aaKnown RBP5.75□□□□□ -1.49
VMP1-213ENST00000591877 ZNF230Q9UIE0 474 aaPredicted RBP5.75□□□□□ -1.49
VMP1-213ENST00000591877 FOXA2Q9Y261 457 aaPredicted RBP5.75□□□□□ -1.49
VMP1-213ENST00000591877 VSIG4Q9Y279 399 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 DNAH9Q9NYC9 4486 aa5.75□□□□□ -1.49
VMP1-213ENST00000591877 TNCP24821 2201 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 SORL1Q92673 2214 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 IGLV5-45A0A087WSX0 123 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 A0A087X0K7 114 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 TRBV6-7A0A0A0MS04 114 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 SEC14L6B5MCN3 397 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 PRSS46E5RG02 174 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 PDCD5O14737 125 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 ARPC1BO15143 372 aaKnown RBP5.74□□□□□ -1.49
VMP1-213ENST00000591877 BET1O15155 118 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 CA2P00918 260 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 IGLV2-23P01705 113 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 APOHP02749 345 aaPredicted RBP5.74□□□□□ -1.49
VMP1-213ENST00000591877 CRYGBP07316 175 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 OR8U9P0C7N5 309 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 HIST1H1DP16402 221 aaKnown RBP5.74□□□□□ -1.49
VMP1-213ENST00000591877 RORCP51449 518 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 ZNF616Q08AN1 781 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 PJVKQ0ZLH3 352 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 GAMTQ14353 236 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 ZNF846Q147U1 533 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 MRGPRG-AS1Q2M3A8 158 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 ZNF562Q6V9R5 426 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 CROCCP3Q8IVE0 287 aa5.74□□□□□ -1.49
VMP1-213ENST00000591877 LFNGQ8NES3 379 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms