RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RAI1Q7Z5J4 1906 aaPredicted RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 LOC102723971A0A1B0GUV8 181 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 SEC14L6B5MCN3 397 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 C9JQL5 133 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 RRHO14718 337 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 SRP19P09132 144 aaKnown RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 GPR6P46095 362 aaPredicted RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 PSMB3P49720 205 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 CCL20P78556 96 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 RHEBQ15382 184 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 BSXQ3C1V8 233 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 SPINK9Q5DT21 86 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 FFAR4Q5NUL3 377 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 AVPI1Q5T686 147 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 TEPPQ6URK8 271 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 ATRAIDQ6UW56 229 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 OR11H6Q8NGC7 330 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 NANPQ8TBE9 248 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 RCC1LQ96I51 464 aaKnown RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 TXNDC17Q9BRA2 123 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 C19orf24Q9BVV8 132 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 VAX2Q9UIW0 290 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 LSM4Q9Y4Z0 139 aaKnown RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 INSIG2Q9Y5U4 225 aa8.43□□□□□ -1.06
VPS25-203ENST00000589520 TLN1Q9Y490 2541 aaKnown RBP8.43□□□□□ -1.06
VPS25-203ENST00000589520 PCNX1Q96RV3 2341 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 SMCO3A2RU48 225 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 CA2P00918 260 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 BCL2P10415 239 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 PRTN3P24158 256 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 PAX6P26367 422 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 RPL29P47914 159 aaKnown RBP8.42□□□□□ -1.06
VPS25-203ENST00000589520 ACSM6Q6P461 480 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 LCN15Q6UWW0 184 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 TMEM144Q7Z5S9 345 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 MMD2Q8IY49 270 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 RPP25LQ8N5L8 163 aaKnown RBP8.42□□□□□ -1.06
VPS25-203ENST00000589520 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
VPS25-203ENST00000589520 RPEQ96AT9 228 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 SRSF8Q9BRL6 282 aaKnown RBP8.42□□□□□ -1.06
VPS25-203ENST00000589520 SMCO4Q9NRQ5 59 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 ARFGEF3Q5TH69 2177 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
VPS25-203ENST00000589520 IGHV1-3A0A0C4DH29 117 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 A0A1W2PPV4 95 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 B4DEV8 164 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 LY6LH3BQJ8 138 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 ACTL6BO94805 426 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 MT-CO2P00403 227 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 IGLV2-23P01705 113 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 HTR1DP28221 377 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 CDC34P49427 236 aaPredicted RBP8.41□□□□□ -1.06
VPS25-203ENST00000589520 ELLP55199 621 aaPredicted RBP8.41□□□□□ -1.06
VPS25-203ENST00000589520 PNRC1Q12796 327 aaPredicted RBP8.41□□□□□ -1.06
VPS25-203ENST00000589520 ICAM4Q14773 271 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 FAM74A3Q4VXF1 159 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 ETFRF1Q6IPR1 90 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 SLC35E3Q7Z769 313 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 RARRES2Q99969 163 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 HINT2Q9BX68 163 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 VSIRQ9H7M9 311 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 DPM3Q9P2X0 92 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
VPS25-203ENST00000589520 TMEM250H0YL14 139 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 TSPAN4O14817 238 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 ENSAO43768 121 aaKnown RBP8.4□□□□□ -1.06
VPS25-203ENST00000589520 CRYGBP07316 175 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 RNASE2P10153 161 aaKnown RBP8.4□□□□□ -1.06
VPS25-203ENST00000589520 UQCRFS1P47985 274 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 REG1BP48304 166 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 CD69Q07108 199 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 HNF4GQ14541 408 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 HAGHQ16775 308 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 MINOS1Q5TGZ0 78 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 CCDC144NLQ6NUI1 221 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 MOB3BQ86TA1 216 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 PNKDQ8N490 385 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.4□□□□□ -1.06
VPS25-203ENST00000589520 RXFP4Q8TDU9 374 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 TMEM170AQ8WVE7 144 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 TVP23CQ96ET8 276 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 RNF2Q99496 336 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 NIPSNAP3BQ9BS92 247 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 UBTD1Q9HAC8 227 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 GNG13Q9P2W3 67 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 ONECUT1Q9UBC0 465 aa8.4□□□□□ -1.06
VPS25-203ENST00000589520 KLF2Q9Y5W3 355 aaPredicted RBP8.4□□□□□ -1.06
VPS25-203ENST00000589520 PXMP4Q9Y6I8 212 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms