RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 C17orf58Q2M2W7 97 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 MPV17LQ2QL34 196 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 GLT8D1Q68CQ7 371 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 VMO1Q7Z5L0 202 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 TPRA1Q86W33 373 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 TMEM17Q86X19 198 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 BPIFB2Q8N4F0 458 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 ZDHHC22Q8N966 263 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 ASCC1Q8N9N2 400 aaKnown RBP2.92□□□□□ -1.94
VMP1-205ENST00000587470 SUMF2Q8NBJ7 301 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 CHST4Q8NCG5 386 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 OR51D1Q8NGF3 324 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 OR13F1Q8NGS4 319 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 KCNG3Q8TAE7 436 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 C17orf50Q8WW18 174 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 C22orf15Q8WYQ4 148 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 H1FXQ92522 213 aaKnown RBP2.92□□□□□ -1.94
VMP1-205ENST00000587470 FAM3DQ96BQ1 224 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 CPNE2Q96FN4 548 aaPredicted RBP2.92□□□□□ -1.94
VMP1-205ENST00000587470 NICN1Q9BSH3 213 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 SELENOIQ9C0D9 397 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 FAM192AQ9GZU8 254 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 NAA50Q9GZZ1 169 aaKnown RBP2.92□□□□□ -1.94
VMP1-205ENST00000587470 LPAR5Q9H1C0 372 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 METTL8Q9H825 291 aaKnown RBP2.92□□□□□ -1.94
VMP1-205ENST00000587470 RAB18Q9NP72 206 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 EXOSC4Q9NPD3 245 aaKnown RBP2.92□□□□□ -1.94
VMP1-205ENST00000587470 ESM1Q9NQ30 184 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 SIRT7Q9NRC8 400 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 GLS2Q9UI32 602 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 KIF25Q9UIL4 384 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 NUP50Q9UKX7 468 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 SSR3Q9UNL2 185 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 LINC00312Q9Y6C7 94 aa2.92□□□□□ -1.94
VMP1-205ENST00000587470 TRAV39A0A0B4J263 110 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TRAV40A0A0B4J280 105 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 LOC100506127A0A0U1RQW1 187 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 KBTBD11-OT1A0A1B0GTJ5 212 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TEX48A0A1B0GUV7 120 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 MDFIC2A0A1B0GVS7 189 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 hADV38S2A0JD32 116 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PCP4L1A6NKN8 68 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 ODF3BA8MYP8 253 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PDCD5O14737 125 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PLXNB1O43157 2135 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 AIREO43918 545 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PDCD6O75340 191 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 ZNF253O75346 499 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 CRTAPO75718 401 aaPredicted RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 OR7C1O76099 320 aaPredicted RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 NAPSAO96009 420 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PAHP00439 452 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 IGLV1-47P01700 117 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PRB2P02812 416 aaPredicted RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 FCGR3AP08637 254 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 IGHV1-8P0DP01 117 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 RCC1P18754 421 aaPredicted RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 RAB3BP20337 219 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 CD34P28906 385 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 BLVRBP30043 206 aaPredicted RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 KCNJ3P48549 501 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 UBE2E1P51965 193 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 EDDM3BP56851 147 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 NCS1P62166 190 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 EDDM3AQ14507 147 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 RAB11BQ15907 218 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 DEFB112Q30KQ8 113 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PAN3Q58A45 887 aaKnown RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 HES5Q5TA89 166 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 METTL11BQ5VVY1 283 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 ZNF880Q6PDB4 577 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 HEPN1Q6WQI6 88 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 BRD3OSQ6XYD6 125 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 GDPD3Q7L5L3 318 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 OR2W3Q7Z3T1 314 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 C6orf201Q7Z4U5 140 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 LINC00596Q86U02 117 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 DYNAPQ8N1N2 210 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PNKDQ8N490 385 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TEX29Q8N6K0 151 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 ZNF491Q8N8L2 437 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 OR4D5Q8NGN0 318 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 RFESDQ8TAC1 157 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PIFOQ8TCI5 191 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 PTX4Q96A99 478 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 KCTD7Q96MP8 289 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 SLC6A7Q99884 636 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 SULT4A1Q9BR01 284 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 FAAP24Q9BTP7 215 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TMEM59Q9BXS4 323 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 MRPS26Q9BYN8 205 aaKnown RBP2.91□□□□□ -1.94
VMP1-205ENST00000587470 GPR61Q9BZJ8 451 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 SPACA1Q9HBV2 294 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 ONECUT1Q9UBC0 465 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 Q9UF83 564 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 RAB22AQ9UL26 194 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 FBXO7Q9Y3I1 522 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms