RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 NDUFA11Q86Y39 141 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 MINDY2Q8NBR6 621 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 UXS1Q8NBZ7 420 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 LSM10Q969L4 123 aaKnown RBP10.87□□□□□ -0.67
TRAF4-215ENST00000584944 PLEKHA3Q9HB20 300 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 ZFP57Q9NU63 452 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 PRR13Q9NZ81 148 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 CACNG5Q9UF02 275 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 SHPKQ9UHJ6 478 aa10.87□□□□□ -0.67
TRAF4-215ENST00000584944 A0A0G2JLM5 398 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 HMX3A6NHT5 357 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 H3BUA1 57 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 DUS4LO95620 317 aaKnown RBP10.86□□□□□ -0.67
TRAF4-215ENST00000584944 IGKV1-5P01602 117 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 RPLP1P05386 114 aaKnown RBP10.86□□□□□ -0.67
TRAF4-215ENST00000584944 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-215ENST00000584944 SNCAP37840 140 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 DEFA6Q01524 100 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 DHRS2Q13268 280 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 DCTN2Q13561 401 aaKnown RBP10.86□□□□□ -0.67
TRAF4-215ENST00000584944 IZUMO4Q1ZYL8 232 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 KLHL30-AS1Q8NEE0 82 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 FAM110DQ8TAY7 271 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-215ENST00000584944 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
TRAF4-215ENST00000584944 PALMDQ9NP74 551 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 TMEM14BQ9NUH8 114 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 ZNF257Q9Y2Q1 563 aa10.86□□□□□ -0.67
TRAF4-215ENST00000584944 VWFP04275 2813 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 CEBPZOSA8MTT3 80 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 PF4P02776 101 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 HOXB5P09067 269 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 RAB9AP51151 201 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 HSPE1P61604 102 aaKnown RBP10.85□□□□□ -0.67
TRAF4-215ENST00000584944 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
TRAF4-215ENST00000584944 CD83Q01151 205 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 IFITM3Q01628 133 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 LYZL2Q7Z4W2 148 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 NRARPQ7Z6K4 114 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 LHFPL5Q8TAF8 219 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 ALX4Q9H161 411 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-215ENST00000584944 THYN1Q9P016 225 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 TMED3Q9Y3Q3 217 aa10.85□□□□□ -0.67
TRAF4-215ENST00000584944 PRKDCP78527 4128 aaKnown RBP10.85□□□□□ -0.67
TRAF4-215ENST00000584944 IGLV1-40P01703 118 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 REG1AP05451 166 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 IL6RP08887 468 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-215ENST00000584944 MYOD1P15172 320 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 HIST1H1BP16401 226 aaKnown RBP10.84□□□□□ -0.67
TRAF4-215ENST00000584944 PSMB8P28062 276 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 PSMB6P28072 239 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
TRAF4-215ENST00000584944 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRAF4-215ENST00000584944 KRTAP10-3P60369 221 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 RPL23AP62750 156 aaKnown RBP10.84□□□□□ -0.67
TRAF4-215ENST00000584944 CFHR3Q02985 330 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 SMCO1Q147U7 214 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 MRGPRG-AS1Q2M3A8 158 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 ANKRD55Q3KP44 614 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 LCNL1Q6ZST4 164 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 ZNF429Q86V71 674 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 TTC9CQ8N5M4 171 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 HIPK2Q9H2X6 1198 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 NOTCH1P46531 2555 aa10.84□□□□□ -0.67
TRAF4-215ENST00000584944 A0A0B4J293 547 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 A0A1B0GU03 582 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 FAM25EA8MYX2 175 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 TEX22C9J3V5 150 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 INMT-MINDY4F8WBC2 141 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 ST8SIA3O43173 380 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 PRAF2O60831 178 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 PTTG1O95997 202 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 AREGP15514 252 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 SPCS3P61009 180 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-215ENST00000584944 PRCDQ00LT1 54 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 ATP5G2Q06055 141 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 RGS21Q2M5E4 152 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 SPINK9Q5DT21 86 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 LRTM2Q8N967 370 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 OR10W1Q8NGF6 305 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 ZNF431Q8TF32 576 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-215ENST00000584944 GPR146Q96CH1 333 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 OR5B12Q96R08 314 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
TRAF4-215ENST00000584944 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
TRAF4-215ENST00000584944 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
TRAF4-215ENST00000584944 WRBO00258 174 aa10.82□□□□□ -0.68
TRAF4-215ENST00000584944 NXPH3O95157 252 aa10.82□□□□□ -0.68
TRAF4-215ENST00000584944 CDX1P47902 265 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-215ENST00000584944 RHOGP84095 191 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms