RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 CADM3Q8N126 398 aa16.35■□□□□ 0.21
ABR-221ENST00000573559 OR10W1Q8NGF6 305 aa16.35■□□□□ 0.21
ABR-221ENST00000573559 OR4A16Q8NH70 328 aa16.35■□□□□ 0.21
ABR-221ENST00000573559 RNASE11Q8TAA1 199 aaKnown RBP16.35■□□□□ 0.21
ABR-221ENST00000573559 USMG5Q96IX5 58 aa16.35■□□□□ 0.21
ABR-221ENST00000573559 MCRIP2Q9BUT9 160 aaKnown RBP16.35■□□□□ 0.21
ABR-221ENST00000573559 AKIP1Q9NQ31 210 aa16.35■□□□□ 0.21
ABR-221ENST00000573559 IGLC7A0M8Q6 106 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 A6NHS1 94 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 FAM223BA6NKX1 122 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 B3GALNT1O75752 331 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 HSPB1P04792 205 aaKnown RBP16.34■□□□□ 0.21
ABR-221ENST00000573559 CTRB1P17538 263 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 UCP1P25874 307 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 EXOSC2Q13868 293 aaKnown RBP16.34■□□□□ 0.21
ABR-221ENST00000573559 BAK1Q16611 211 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 CTRB2Q6GPI1 263 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 FAM223AQ8IWN6 122 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 GPR61Q9BZJ8 451 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 FKBP11Q9NYL4 201 aa16.34■□□□□ 0.21
ABR-221ENST00000573559 CRYM-AS1A6NIL9 109 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 IGKV1-5P01602 117 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 MECP2P51608 486 aaKnown RBP16.33■□□□□ 0.2
ABR-221ENST00000573559 ATP5G2Q06055 141 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 IZUMO4Q1ZYL8 232 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 CNPY1Q3B7I2 92 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 SGPP2Q8IWX5 399 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 NECAP1Q8NC96 275 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 DEDD2Q8WXF8 326 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 SRSF8Q9BRL6 282 aaKnown RBP16.33■□□□□ 0.2
ABR-221ENST00000573559 TMEM14BQ9NUH8 114 aa16.33■□□□□ 0.2
ABR-221ENST00000573559 TRBV9A0A0B4J1U6 114 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 LINC00854A0A1B0GVQ3 168 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 DBX1A6NMT0 343 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 CRYGCP07315 174 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 OR13C7P0DN81 318 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 AKR1C4P17516 323 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 KPRPQ5T749 579 aaPredicted RBP16.32■□□□□ 0.2
ABR-221ENST00000573559 OR5B3Q8NH48 314 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 DCUN1D4Q92564 292 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 LSM10Q969L4 123 aaKnown RBP16.32■□□□□ 0.2
ABR-221ENST00000573559 TMEM230Q96A57 120 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 RRNAD1Q96FB5 475 aaKnown RBP16.32■□□□□ 0.2
ABR-221ENST00000573559 SDHCQ99643 169 aaPredicted RBP16.32■□□□□ 0.2
ABR-221ENST00000573559 TMEM222Q9H0R3 208 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 RANGRFQ9HD47 186 aaPredicted RBP16.32■□□□□ 0.2
ABR-221ENST00000573559 NDUFA4L2Q9NRX3 87 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 FBXL7Q9UJT9 491 aa16.32■□□□□ 0.2
ABR-221ENST00000573559 MEGF8Q7Z7M0 2845 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 SEC14L6B5MCN3 397 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 HOXD3P31249 432 aaPredicted RBP16.31■□□□□ 0.2
ABR-221ENST00000573559 DHODHQ02127 395 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 C15orf32Q32M92 178 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 ZNF343Q6P1L6 599 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 TMED4Q7Z7H5 227 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 GLYATL2Q8WU03 294 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 TMEM56Q96MV1 263 aa16.31■□□□□ 0.2
ABR-221ENST00000573559 PEF1Q9UBV8 284 aaKnown RBP16.31■□□□□ 0.2
ABR-221ENST00000573559 OVOL1O14753 267 aa16.3■□□□□ 0.2
ABR-221ENST00000573559 TRBV12-3P01733 135 aa16.3■□□□□ 0.2
ABR-221ENST00000573559 PRB2P02812 416 aaPredicted RBP16.3■□□□□ 0.2
ABR-221ENST00000573559 HIST1H1BP16401 226 aaKnown RBP16.3■□□□□ 0.2
ABR-221ENST00000573559 HSD17B13Q7Z5P4 300 aaPredicted RBP16.3■□□□□ 0.2
ABR-221ENST00000573559 LHFPL5Q8TAF8 219 aa16.3■□□□□ 0.2
ABR-221ENST00000573559 DLX4Q92988 240 aaPredicted RBP16.3■□□□□ 0.2
ABR-221ENST00000573559 FANCD2OSQ96PS1 177 aa16.3■□□□□ 0.2
ABR-221ENST00000573559 KCNIP3Q9Y2W7 256 aa16.3■□□□□ 0.2
ABR-221ENST00000573559 NDUFB8O95169 186 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 IL7P13232 177 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 ZP3P21754 424 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 WT1-ASQ06250 92 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 C9orf66Q5T8R8 295 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 TMEM268Q5VZI3 342 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 RBPMSQ93062 196 aaKnown RBP16.29■□□□□ 0.2
ABR-221ENST00000573559 SLC25A21Q9BQT8 299 aaPredicted RBP16.29■□□□□ 0.2
ABR-221ENST00000573559 PRR13Q9NZ81 148 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 S4R3C0 116 aa16.29■□□□□ 0.2
ABR-221ENST00000573559 IGLV11-55A0A075B6I3 123 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 CYB5BO43169 146 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 CDS2O95674 445 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 IGHV3-23P01764 117 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 P0C879 139 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 SPINK9Q5DT21 86 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 SELENOHQ8IZQ5 122 aaKnown RBP16.28■□□□□ 0.2
ABR-221ENST00000573559 GALNT14Q96FL9 552 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 PDCD10Q9BUL8 212 aa16.28■□□□□ 0.2
ABR-221ENST00000573559 A0A0G2JRQ6 117 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 NAP1L6A6NFF2 107 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 ANXA3P12429 323 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 CCR6P51684 374 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 PRCDQ00LT1 54 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 TMEM187Q14656 261 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 RBMS2Q15434 407 aaKnown RBP16.27■□□□□ 0.2
ABR-221ENST00000573559 EEF1AKMT3Q96AZ1 226 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 PLEKHA3Q9HB20 300 aa16.27■□□□□ 0.2
ABR-221ENST00000573559 A0A0B4J293 547 aa16.26■□□□□ 0.19
ABR-221ENST00000573559 CENPXA8MT69 81 aa16.26■□□□□ 0.19
ABR-221ENST00000573559 IFNA17P01571 189 aa16.26■□□□□ 0.19
ABR-221ENST00000573559 HSPE1P61604 102 aaKnown RBP16.26■□□□□ 0.19
ABR-221ENST00000573559 RPEL1Q2QD12 228 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms