RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 A0A0B4J293 547 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 DBX1A6NMT0 343 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 E7EUB6 86 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 IGHG4P01861 327 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 IL5P05113 134 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 P0C879 139 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 PPIFP30405 207 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 KRTAP10-3P60369 221 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 HSPE1P61604 102 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 CFHR3Q02985 330 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 FOXE3Q13461 319 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 ZNF429Q86V71 674 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 OR1S1Q8NH92 325 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 SPATA3Q8NHX4 192 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 FAM110DQ8TAY7 271 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 WIPF2Q8TF74 440 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 STAB1Q9NY15 2570 aa11.37□□□□□ -0.59
NPLOC4-209ENST00000572760 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 PRAF2O60831 178 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 SPNP16150 400 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 NMSQ5H8A3 153 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 ASPHD1Q5U4P2 390 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 Q6ZRM9 215 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 HSD17B13Q7Z5P4 300 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 MITD1Q8WV92 249 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 MS4A10Q96PG2 267 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 CITED1Q99966 193 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 CITED2Q99967 270 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 SRSF8Q9BRL6 282 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 CACFD1Q9UGQ2 172 aa11.36□□□□□ -0.59
NPLOC4-209ENST00000572760 A0A1B0GU03 582 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 CGB1A6NKQ9 187 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 TRGV3P03979 118 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 REG1AP05451 166 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 DEFA4P12838 97 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 AREGP15514 252 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 PSMB6P28072 239 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 RAB9AP51151 201 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 TPPP2P59282 170 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 ERHP84090 104 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 PRCDQ00LT1 54 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 CD83Q01151 205 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 SPINK9Q5DT21 86 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 HIST2H2BDQ6DRA6 164 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 OR10W1Q8NGF6 305 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 SLA2Q9H6Q3 261 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 ZFP57Q9NU63 452 aa11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-209ENST00000572760 A0A1B0GW64 132 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 A0A1W2PRX2 142 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 NUDT19A8MXV4 375 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 H3BUA1 57 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 CYB5BO43169 146 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 SOX15O60248 233 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 ADAP1O75689 374 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 NXPH3O95157 252 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 IGLV1-40P01703 118 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 RPLP1P05386 114 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 PSMB8P28062 276 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 HOXA1P49639 335 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 SPCS3P61009 180 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 NSUN5P1Q3KNT7 163 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 TCTEX1D4Q5JR98 221 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 OR52E5Q8NH55 327 aa11.34□□□□□ -0.59
NPLOC4-209ENST00000572760 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 SNRPGP15A8MWD9 76 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 SLC25A6P12236 298 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 NDUFA11Q86Y39 141 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 KLK15Q9H2R5 256 aa11.33□□□□□ -0.6
NPLOC4-209ENST00000572760 C13orf42A0A1B0GVH6 325 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 PRH1P02810 166 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 CRYGCP07315 174 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 CTRB1P17538 263 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 SNCAP37840 140 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 RPL23AP62750 156 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 WT1-ASQ06250 92 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 CTRB2Q6GPI1 263 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
NPLOC4-209ENST00000572760 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms