RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.09□□□□□ -0.31
CLN6-208ENST00000567060 OR51B2Q9Y5P1 312 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 TRAV6A0A075B6T7 132 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 A0A1B0GU03 582 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 A0A1W2PN81 502 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 RBMXL2O75526 392 aaKnown RBP13.08□□□□□ -0.32
CLN6-208ENST00000567060 DHFRP00374 187 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 PSMB8P28062 276 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 CHRNA7P36544 502 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 HSPE1P61604 102 aaKnown RBP13.08□□□□□ -0.32
CLN6-208ENST00000567060 CD83Q01151 205 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 NMSQ5H8A3 153 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 TTC9CQ8N5M4 171 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 FAM110DQ8TAY7 271 aaPredicted RBP13.08□□□□□ -0.32
CLN6-208ENST00000567060 CASTOR1Q8WTX7 329 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 FAM103A1Q9BTL3 118 aaKnown RBP13.08□□□□□ -0.32
CLN6-208ENST00000567060 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
CLN6-208ENST00000567060 NDUFA4L2Q9NRX3 87 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
CLN6-208ENST00000567060 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 TEX22C9J3V5 150 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 INS-IGF2F8WCM5 200 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 G3V318 75 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 CYB5BO43169 146 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 SULT1A3P0DMM9 295 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 SULT1A4P0DMN0 295 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 ANKRD55Q3KP44 614 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 TMEM65Q6PI78 240 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 NDUFA11Q86Y39 141 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 ZNF431Q8TF32 576 aaPredicted RBP13.07□□□□□ -0.32
CLN6-208ENST00000567060 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
CLN6-208ENST00000567060 RYR3Q15413 4870 aa13.07□□□□□ -0.32
CLN6-208ENST00000567060 A0A0B4J293 547 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 INMT-MINDY4F8WBC2 141 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 IFNA21P01568 189 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 CRYGCP07315 174 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 KLK9Q2XQG4 91 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 ASPHD1Q5U4P2 390 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 LYZL2Q7Z4W2 148 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 ZNF329Q86UD4 541 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 MYOZ3Q8TDC0 251 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 FYTTD1Q96QD9 318 aaKnown RBP13.06□□□□□ -0.32
CLN6-208ENST00000567060 KLK9Q9UKQ9 250 aa13.06□□□□□ -0.32
CLN6-208ENST00000567060 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 FAM90A26D6RGX4 464 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 M0QZ24 198 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 HIST1H1BP16401 226 aaKnown RBP13.05□□□□□ -0.32
CLN6-208ENST00000567060 PSMB6P28072 239 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 SPCS3P61009 180 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 SMCO1Q147U7 214 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 FAM209BQ5JX69 171 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 C10orf55Q5SWW7 151 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 CACNG5Q9UF02 275 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 NSG2Q9Y328 171 aa13.05□□□□□ -0.32
CLN6-208ENST00000567060 A0A0G2JLM5 398 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 TCRBV4S1A1TA0A5B7 111 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 E7EUB6 86 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 LY86O95711 162 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 CD28P10747 220 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 CTRB1P17538 263 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
CLN6-208ENST00000567060 RAB9AP51151 201 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 RGS21Q2M5E4 152 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 CTRB2Q6GPI1 263 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 USMG5Q96IX5 58 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 PLEKHA3Q9HB20 300 aa13.04□□□□□ -0.32
CLN6-208ENST00000567060 TET2Q6N021 2002 aaPredicted RBP13.03□□□□□ -0.32
CLN6-208ENST00000567060 A0A1B0GW64 132 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 CGB1A6NKQ9 187 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 DBX1A6NMT0 343 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 ST8SIA3O43173 380 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 SOX15O60248 233 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 IFNA17P01571 189 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 PF4V1P10720 104 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
CLN6-208ENST00000567060 ERHP84090 104 aaKnown RBP13.03□□□□□ -0.32
CLN6-208ENST00000567060 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 Q6ZRM9 215 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 ZNF114Q8NC26 417 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 CITED2Q99967 270 aaPredicted RBP13.03□□□□□ -0.32
CLN6-208ENST00000567060 ENY2Q9NPA8 101 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 THYN1Q9P016 225 aa13.03□□□□□ -0.32
CLN6-208ENST00000567060 DNAH3Q8TD57 4116 aa13.02□□□□□ -0.32
CLN6-208ENST00000567060 TRBV9A0A0B4J1U6 114 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 HMX3A6NHT5 357 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms