RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 M0R135 149 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 SDCBPO00560 298 aaPredicted RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 HSD17B6O14756 317 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 AGPAT2O15120 278 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 TXNL1O43396 289 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 XRCC2O43543 280 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 CYB5R3P00387 301 aaPredicted RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 IFNA5P01569 189 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 OR5AC1P0C628 307 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 FUT3P21217 361 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 CD200P41217 278 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 RPS10P46783 165 aaKnown RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 HAAOP46952 286 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 RPL23AP62750 156 aaKnown RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 HLA-DRB3P79483 266 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 COA6Q5JTJ3 125 aaKnown RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 DPPA2Q7Z7J5 298 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF429Q86V71 674 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 OSR2Q8N2R0 312 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 GPR137CQ8N3F9 429 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 OR5D13Q8NGL4 314 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 MBD3L1Q8WWY6 194 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 RAB39BQ96DA2 213 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 BORCS8Q96FH0 119 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF799Q96GE5 643 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 METTL7AQ9H8H3 244 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 WFDC1Q9HC57 220 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 AK3Q9UIJ7 227 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 MCTS1Q9ULC4 181 aaKnown RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 PIGLQ9Y2B2 252 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 WSB1Q9Y6I7 421 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ABCA4P78363 2273 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 SPG11Q96JI7 2443 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 RTTNQ86VV8 2226 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 TRBV11-1A0A0K0K1C0 115 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 OR6C6A6NF89 314 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF724A8MTY0 619 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 H0Y980 276 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 RER1O15258 196 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 TCF21O43680 179 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 GAS8-AS1O95177 125 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ATP6V0CP27449 155 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 PTGDSP41222 190 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 HILS1P60008 231 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ENDOGQ14249 297 aaKnown RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ELOBQ15370 118 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 Q6ZVQ6 151 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF695Q8IW36 515 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 C20orf196Q8IYI0 205 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 CMTM1Q8IZ96 169 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 BHLHE23Q8NDY6 225 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 LINC01560Q8TB33 94 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 NABP1Q96AH0 204 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ACY3Q96HD9 319 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 DOK5Q9P104 306 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 MRPS18CQ9Y3D5 142 aaKnown RBP3.33□□□□□ -1.88
LINC00561-201ENST00000565815 TIMM9Q9Y5J7 89 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF816-ZNF321PA0A0X1KG74 233 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 OR5H1A6NKK0 313 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 GEMIN2O14893 280 aaKnown RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 GCGP01275 180 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 PPYP01298 95 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 FGF7P21781 194 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 GABRR1P24046 479 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 NPBWR2P48146 333 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 DSCR4P56555 118 aaPredicted RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 PRDX4Q13162 271 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 MSMO1Q15800 293 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 SSX2Q16385 188 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 Q3ZCU0 254 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 LANCL3Q6ZV70 420 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 MOB1BQ7L9L4 216 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 C6orf201Q7Z4U5 140 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 LYZL2Q7Z4W2 148 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM123Q8N131 208 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM252Q8N6L7 170 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 OR2V1Q8NHB1 315 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 CLDND2Q8NHS1 167 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 LSM10Q969L4 123 aaKnown RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 EMC6Q9BV81 110 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 SMIM3Q9BZL3 60 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 PLEKHA3Q9HB20 300 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 ELL3Q9HB65 397 aaPredicted RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 TECRQ9NZ01 308 aaKnown RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF319Q9P2F9 582 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 FBXO7Q9Y3I1 522 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 PUS1Q9Y606 427 aaKnown RBP eCLIP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 INTS1Q8N201 2190 aaKnown RBP3.32□□□□□ -1.88
LINC00561-201ENST00000565815 IGHV3-20A0A0C4DH32 117 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 A0A1W2PPE3 182 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 SMCO3A2RU48 225 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 FAM166BA8MTA8 275 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 DEFB108AA8MXU0 73 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 PPP5D1E7EU14 171 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM250H0YL14 139 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 IGLV1-44P01699 117 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 MBP02144 154 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 OR13C7P0DN81 318 aa3.32□□□□□ -1.88
LINC00561-201ENST00000565815 BCL2P10415 239 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms