RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
SPG7-209ENST00000564047 CACNG5Q9UF02 275 aa10.29□□□□□ -0.76
SPG7-209ENST00000564047 SIGLEC9Q9Y336 463 aa10.29□□□□□ -0.76
SPG7-209ENST00000564047 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 NCBP2LA6PVI3 153 aaKnown RBP10.28□□□□□ -0.76
SPG7-209ENST00000564047 KRBOX1C9JBD0 128 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 FGF16O43320 207 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 HOXA3O43365 443 aaPredicted RBP10.28□□□□□ -0.76
SPG7-209ENST00000564047 PITX3O75364 302 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 IZUMO4Q1ZYL8 232 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 C5orf64Q2M2E5 130 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 AARDQ4LEZ3 155 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 PPP1R27Q86WC6 154 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 FOXRED2Q8IWF2 684 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 MMD2Q8IY49 270 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 FAM71E2Q8N5Q1 922 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 Q8N9W7 124 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 OR4A16Q8NH70 328 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 PCNPQ8WW12 178 aaKnown RBP10.28□□□□□ -0.76
SPG7-209ENST00000564047 CXorf58Q96LI9 332 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 SLC25A33Q9BSK2 321 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 FBXL15Q9H469 300 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.28□□□□□ -0.76
SPG7-209ENST00000564047 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 PRNDQ9UKY0 176 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 MOB4Q9Y3A3 225 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 POMT1Q9Y6A1 747 aa10.28□□□□□ -0.76
SPG7-209ENST00000564047 C15orf61A6NNL5 157 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 M0QZK8 103 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 RPL8P62917 257 aaKnown RBP10.27□□□□□ -0.77
SPG7-209ENST00000564047 PLGLAQ15195 96 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 LY6EQ16553 131 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 PRSS8Q16651 343 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 MRGPRG-AS1Q2M3A8 158 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 ZNF429Q86V71 674 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 TMEM219Q86XT9 240 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.77
SPG7-209ENST00000564047 CYTL1Q9NRR1 136 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 TPSG1Q9NRR2 321 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 FKBP11Q9NYL4 201 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 GSKIPQ9P0R6 139 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 VPREB3Q9UKI3 123 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
SPG7-209ENST00000564047 NSG2Q9Y328 171 aa10.27□□□□□ -0.77
SPG7-209ENST00000564047 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 RBMXL2O75526 392 aaKnown RBP10.26□□□□□ -0.77
SPG7-209ENST00000564047 DEDDO75618 318 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 FAM157CP0CG43 387 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 MAS1LP35410 378 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 KRTAP24-1Q3LI83 254 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 C5orf56Q8N8D9 126 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 OR52E5Q8NH55 327 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 ZNF418Q8TF45 676 aaPredicted RBP10.26□□□□□ -0.77
SPG7-209ENST00000564047 RASL11BQ9BPW5 248 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 TMEM14BQ9NUH8 114 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
SPG7-209ENST00000564047 E5RGE8 158 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 FCN1O00602 326 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 HLA-DRB1P01911 266 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 HKR1P10072 659 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 M6PRP20645 277 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 OR2B8PP59922 312 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 S100A10P60903 97 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 HSPE1P61604 102 aaKnown RBP10.25□□□□□ -0.77
SPG7-209ENST00000564047 ID3Q02535 119 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 PJVKQ0ZLH3 352 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 PDLIM3Q53GG5 364 aaPredicted RBP10.25□□□□□ -0.77
SPG7-209ENST00000564047 EIF5AL1Q6IS14 154 aaKnown RBP10.25□□□□□ -0.77
SPG7-209ENST00000564047 OR5B3Q8NH48 314 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 C19orf24Q9BVV8 132 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 QTRT1Q9BXR0 403 aaKnown RBP10.25□□□□□ -0.77
SPG7-209ENST00000564047 COMMD5Q9GZQ3 224 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 OR51B2Q9Y5P1 312 aa10.25□□□□□ -0.77
SPG7-209ENST00000564047 TEX50A0A1B0GTY4 177 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 RAB19A4D1S5 217 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 MSGN1A6NI15 193 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 CLDN34H7C241 214 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 ST8SIA3O43173 380 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 CHST1O43916 411 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 ACTL6BO94805 426 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 CA2P00918 260 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 AMY1AP04745 511 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 RPL12P30050 165 aaKnown RBP10.24□□□□□ -0.77
SPG7-209ENST00000564047 NKX2-1P43699 371 aaPredicted RBP10.24□□□□□ -0.77
SPG7-209ENST00000564047 SPCS3P61009 180 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 TNXAQ16473 311 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
SPG7-209ENST00000564047 UQCC3Q6UW78 93 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 ZNF562Q6V9R5 426 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 STPG2Q8N412 459 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 RNF141Q8WVD5 230 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 CLCC1Q96S66 551 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 MEGF8Q7Z7M0 2845 aa10.24□□□□□ -0.77
SPG7-209ENST00000564047 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms