RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
COMMD4-206ENST00000562610 TEX50A0A1B0GTY4 177 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 C15orf61A6NNL5 157 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 LY86O95711 162 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
COMMD4-206ENST00000562610 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.43
COMMD4-206ENST00000562610 MECP2P51608 486 aaKnown RBP12.38□□□□□ -0.43
COMMD4-206ENST00000562610 AKR1C2P52895 323 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 TRIM16LQ309B1 348 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 PYDC2Q56P42 97 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 OR4C12Q96R67 309 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 PRR25Q96S07 402 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 TP53RKQ96S44 253 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 PRRT1Q99946 306 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
COMMD4-206ENST00000562610 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 MCUBQ9NWR8 336 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 PRNDQ9UKY0 176 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 S4R3C0 116 aa12.38□□□□□ -0.43
COMMD4-206ENST00000562610 TGP01266 2768 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 C3orf85A0A1B0GTC6 90 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 NDUFB8O95169 186 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 IGHV3-23P01764 117 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-206ENST00000562610 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 OR4A16Q8NH70 328 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 LSM10Q969L4 123 aaKnown RBP12.37□□□□□ -0.43
COMMD4-206ENST00000562610 SOSTQ9BQB4 213 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-206ENST00000562610 V9GYH0 126 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 SORL1Q92673 2214 aa12.37□□□□□ -0.43
COMMD4-206ENST00000562610 IGLV11-55A0A075B6I3 123 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.36□□□□□ -0.43
COMMD4-206ENST00000562610 PPP5D1E7EU14 171 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 OR13C7P0DN81 318 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 SP6Q3SY56 376 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 FAM209BQ5JX69 171 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 HSD17B13Q7Z5P4 300 aaPredicted RBP12.36□□□□□ -0.43
COMMD4-206ENST00000562610 HAPLN4Q86UW8 402 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 CADM3Q8N126 398 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 GDPD1Q8N9F7 314 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 OR9G4Q8NGQ1 327 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 OR6Q1Q8NGQ2 317 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 OR5B3Q8NH48 314 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 RNASE11Q8TAA1 199 aaKnown RBP12.36□□□□□ -0.43
COMMD4-206ENST00000562610 EEF1AKMT3Q96AZ1 226 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 THAP7Q9BT49 309 aaPredicted RBP12.36□□□□□ -0.43
COMMD4-206ENST00000562610 NDUFA4L2Q9NRX3 87 aa12.36□□□□□ -0.43
COMMD4-206ENST00000562610 TEX13DA0A0J9YY54 714 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-206ENST00000562610 DBX1A6NMT0 343 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 BMPR1BO00238 502 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 CYB5BO43169 146 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 WT1-ASQ06250 92 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
COMMD4-206ENST00000562610 KLF5Q13887 457 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-206ENST00000562610 SURF2Q15527 256 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-206ENST00000562610 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 Q8N402 240 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 TMEM56Q96MV1 263 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 TMEM14BQ9NUH8 114 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 THYN1Q9P016 225 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 SCP2D1Q9UJQ7 156 aa12.35□□□□□ -0.43
COMMD4-206ENST00000562610 MFSD2BA6NFX1 497 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 ATG12O94817 140 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 FAUP35544 74 aaKnown RBP12.34□□□□□ -0.43
COMMD4-206ENST00000562610 ARL3P36405 182 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 ZNF79Q15937 498 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 SPANXN2Q5MJ10 180 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 CLEC19AQ6UXS0 136 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 CCDC190Q86UF4 302 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 TRIM63Q969Q1 353 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 CXorf58Q96LI9 332 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 CCDC140Q96MF4 163 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 C5orf66Q9H5L9 145 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 NAA60Q9H7X0 242 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 SLC2A8Q9NY64 477 aa12.34□□□□□ -0.43
COMMD4-206ENST00000562610 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 HLA-AP01891 365 aaKnown RBP12.33□□□□□ -0.44
COMMD4-206ENST00000562610 SPNP16150 400 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 UCP1P25874 307 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 AP3S2P59780 193 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 SLC25A24Q6NUK1 477 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 RTBDNQ9BSG5 229 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-206ENST00000562610 PEMTQ9UBM1 199 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 DMRT1Q9Y5R6 373 aa12.33□□□□□ -0.44
COMMD4-206ENST00000562610 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
COMMD4-206ENST00000562610 TRBV7-1A0A0A6YYK4 115 aa12.32□□□□□ -0.44
COMMD4-206ENST00000562610 GGCTO75223 188 aaKnown RBP12.32□□□□□ -0.44
COMMD4-206ENST00000562610 KLF9Q13886 244 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms