RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 C11orf52Q96A22 123 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 NAT8BQ9UHF3 227 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 PRRC2CQ9Y520 2896 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 CACNA1GO43497 2377 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 A0A1W2PPV4 95 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 RAMP3O60896 148 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 MPDU1O75352 247 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 CXorf1O96002 111 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 CX3CL1P78423 397 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 PRR27Q6MZM9 219 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 Q6ZVH6 145 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 MOB1BQ7L9L4 216 aa11.58□□□□□ -0.56
RABGGTA-220ENST00000560998 AGFG2O95081 481 aa11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 OR2H2O95918 312 aa11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 MPV17P39210 176 aa11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 FOXF2Q12947 444 aa11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 KLF14Q8TD94 323 aaPredicted RBP11.57□□□□□ -0.56
RABGGTA-220ENST00000560998 TRGV10A0A0A0MS01 117 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 H0YJW9 148 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 CDIPTO14735 213 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 IGLV2-14P01704 120 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 HOXC12P31275 282 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF497Q6ZNH5 498 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 OR1L1Q8NH94 360 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 TAAR6Q96RI8 345 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 WNT10AQ9GZT5 417 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 PLSCR4Q9NRQ2 329 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 V9GYV3 84 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 CNOT1A5YKK6 2376 aaKnown RBP11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 AHRRA9YTQ3 701 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 AMY1AP04745 511 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 LINC00869P0C866 280 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 APOBEC3AP31941 199 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 THBS3P49746 956 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 SELENOVP59797 346 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF146Q15072 292 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 FGFRL1Q8N441 504 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-220ENST00000560998 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 LRRC30A6NM36 301 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 K7EN84 100 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 SLC17A3O00476 420 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 GRPP07492 148 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 NBEAP1P0C6P0 100 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 P0C879 139 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 STAG3L2P0CL84 134 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 STAG3L3P0CL85 134 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 TCF15Q12870 199 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 TBR1Q16650 682 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 FAM71F2Q6NXP2 309 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 TCF24Q7RTU0 167 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 ZADH2Q8N4Q0 377 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 ST6GALNAC3Q8NDV1 305 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 ST20Q9HBF5 79 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 OR1A1Q9P1Q5 309 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 FRYQ5TBA9 3013 aa11.55□□□□□ -0.56
RABGGTA-220ENST00000560998 IGHV3-64DA0A0J9YX35 117 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 TAX1BP3O14907 124 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 MT-CO2P00403 227 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 PSG1P11464 419 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 OPRK1P41145 380 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 CXorf67Q86X51 503 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 OR8I2Q8N0Y5 310 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 DEFB125Q8N687 156 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 Q8N7P7 452 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 EAF1Q96JC9 268 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 CLEC7AQ9BXN2 247 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 HES4Q9HCC6 221 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 DKK4Q9UBT3 224 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 PPP1R3CQ9UQK1 317 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 CECR9P0C854 216 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 C12orf54Q6X4T0 127 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 OR8B3Q8NGG8 313 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 IL1F10Q8WWZ1 152 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 OR8B2Q96RD0 313 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 OBP2BQ9NPH6 170 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 OSTCQ9NRP0 149 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 RPH3ALQ9UNE2 315 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 RNF24Q9Y225 148 aa11.54□□□□□ -0.56
RABGGTA-220ENST00000560998 BMPR1BO00238 502 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 CGAP01215 116 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 IGLV1-44P01699 117 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 AREGP15514 252 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 SRIP30626 198 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 C11orf53Q8IXP5 236 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms