RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 MC5RP33032 325 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 TMEM249Q2WGJ8 235 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 RNF212Q495C1 297 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 SPINK9Q5DT21 86 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 OR4C13Q8NGP0 309 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 RBKSQ9H477 322 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 TMEM231Q9H6L2 316 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 NOTCH2Q04721 2471 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 TRAV40A0A0B4J280 105 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 E5RGE8 158 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 UBE2CO00762 179 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 TXNL1O43396 289 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 SYNGR2O43760 224 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 VENTXO95231 258 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 SFTA3P0C7M3 94 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 IAPPP10997 89 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 ERVK-16P61578 105 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 ZFP82Q8N141 532 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 C7orf69Q9H7B7 122 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 TRAV20A0A0B4J274 112 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 IGSF23A1L1A6 192 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 C15orf61A6NNL5 157 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 UPK2O00526 184 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 NPFFO15130 113 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 S100A6P06703 90 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 CRYGBP07316 175 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 NANPQ8TBE9 248 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 HRH4Q9H3N8 390 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-209ENST00000559551 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.58
RABGGTA-209ENST00000559551 C5orf52A6NGY3 159 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 FAM90A26D6RGX4 464 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 WRBO00258 174 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 CEACAM3P40198 252 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 UBE2KP61086 200 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 SNRPEP62304 92 aaKnown RBP11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 IGHV1-69DA0A0B4J2H0 117 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 LINC00587B1AMM8 73 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 E7EUB6 86 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 H3BP45 60 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 SLC25A17O43808 307 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 FBXO24O75426 580 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 KBTBD11O94819 623 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 IGHV1-69P01742 117 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 CD5P06127 495 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 P2RY1P47900 373 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 LGALS4P56470 323 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 ZNF429Q86V71 674 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 FAM96BQ9Y3D0 163 aa11.45□□□□□ -0.58
RABGGTA-209ENST00000559551 TGFAP01135 160 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 IGKV1D-33P01593 117 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 IGKV1-33P01594 117 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 MT-ND4LP03901 98 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 CD1BP29016 333 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 F2RL1P55085 397 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 NHLH2Q02577 135 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 PDLIM3Q53GG5 364 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 FAM120AOSQ5T036 256 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 OR2C3Q8N628 320 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 OR4A16Q8NH70 328 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 TMEM167AQ8TBQ9 72 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 PARP11Q9NR21 331 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 GSN-AS1Q9NRJ2 163 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 METTL1Q9UBP6 276 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 A0A1B0GW64 132 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 CGB1A6NKQ9 187 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 MED6O75586 246 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 SNRNP70P08621 437 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 S100PP25815 95 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 SULT1A2P50226 295 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 PSG5Q15238 335 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 FAM209BQ5JX69 171 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 HAPLN4Q86UW8 402 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 THNSL2Q86YJ6 484 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 TMEM252Q8N6L7 170 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 EAF1Q96JC9 268 aaPredicted RBP11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 FOXC2Q99958 501 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 OR51M1Q9H341 326 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
RABGGTA-209ENST00000559551 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
RABGGTA-209ENST00000559551 RBMXL2O75526 392 aaKnown RBP11.43□□□□□ -0.58
RABGGTA-209ENST00000559551 VDAC2P45880 294 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-209ENST00000559551 HNF4GQ14541 408 aa11.43□□□□□ -0.58
RABGGTA-209ENST00000559551 BTNL8Q6UX41 500 aa11.43□□□□□ -0.58
RABGGTA-209ENST00000559551 Q8N6K4 173 aa11.43□□□□□ -0.58
RABGGTA-209ENST00000559551 HIST1H2BAQ96A08 127 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms