RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CFL1P23528 166 aaKnown RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 BLVRBP30043 206 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 DDOSTP39656 456 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 MYCNOSP40205 109 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 VHLP40337 213 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ARFRP1Q13795 201 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 GNMTQ14749 295 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 HLA-DRB5Q30154 266 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 SAMD4BQ5PRF9 694 aaKnown RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 CLVS2Q5SYC1 327 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF322Q6U7Q0 402 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ARPINQ7Z6K5 226 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 TMEM17Q86X19 198 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF573Q86YE8 665 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 FAM58AQ8N1B3 248 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 C6orf223Q8N319 242 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 YIPF7Q8N8F6 280 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 OR51A2Q8NGJ7 313 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 OR51G1Q8NGK1 321 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 OR1N2Q8NGR9 330 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 OR8U1Q8NH10 309 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ISOC1Q96CN7 298 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 BORCS8Q96FH0 119 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 AKR1E2Q96JD6 320 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 KCTD7Q96MP8 289 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 CLCC1Q96S66 551 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 CNN2Q99439 309 aaKnown RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 FAM192AQ9GZU8 254 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 PARP12Q9H0J9 701 aaKnown RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 DNTTIP1Q9H147 329 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ANKRD19PQ9H560 264 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 EDA2RQ9HAV5 297 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 PLEKHA1Q9HB21 404 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 HES4Q9HCC6 221 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 EXOSC4Q9NPD3 245 aaKnown RBP1.71□□□□□ -2.14
SCFD1-219ENST00000556413 CMC2Q9NRP2 79 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 CALYQ9NYX4 217 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 GNG8Q9UK08 70 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 PITPNC1Q9UKF7 332 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 OR52A1Q9UKL2 312 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 HHLA2Q9UM44 414 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 POLDIP2Q9Y2S7 368 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 LINC00312Q9Y6C7 94 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 R4GMQ9 66 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 S4R3C0 116 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 V9GYS6 101 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IGHV3OR16-13A0A075B7E8 117 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IGHV1-3A0A0C4DH29 117 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 A0A1W2PQL4 384 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 LEUTXA8MZ59 168 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 C12orf77C9JDV5 145 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 C11orf94C9JXX5 98 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 H0YJX3 145 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 LY6LH3BQJ8 138 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CCRL2O00421 344 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 SDCBPO00560 298 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 GNGT2O14610 69 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OVOL1O14753 267 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 DEGS1O15121 323 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 NBR2O15453 112 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 SOX15O60248 233 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 E2F6O75461 281 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 SCGB2A1O75556 95 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CDRT1O95170 752 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CST1P01037 141 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IGLV3-1P01715 115 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 PRH1P02810 166 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OCM2P0CE71 109 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OCMP0CE72 109 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CHTF8P0CG12 524 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 ATF1P18846 271 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 BRS3P32247 399 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 POLR2IP36954 125 aaKnown RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IFNGR2P38484 337 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 SLC35B1P78383 322 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 ADARB1P78563 741 aaKnown RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 IL24Q13007 206 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 KIR2DS1Q14954 304 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 PSG5Q15238 335 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 MMDQ15546 238 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF829Q3KNS6 432 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-219ENST00000556413 COQ5Q5HYK3 327 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 TEX30Q5JUR7 227 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 MINOS1Q5TGZ0 78 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 TMEM42Q69YG0 159 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR2T5Q6IEZ7 315 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 FTMTQ8N4E7 242 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 DEFB125Q8N687 156 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR5A2Q8NGI9 324 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR4D6Q8NGJ1 314 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR10X1Q8NGY0 326 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR2T29Q8NH02 315 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR4K15Q8NH41 348 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 OR1L1Q8NH94 360 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 GRPEL2Q8TAA5 225 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 NEK7Q8TDX7 302 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 C4orf3Q8WVX3 66 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 CACNG8Q8WXS5 425 aa1.7□□□□□ -2.14
SCFD1-219ENST00000556413 HOPXQ9BPY8 73 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms