RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 NKX2-5P52952 324 aaPredicted RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 RPL26P61254 145 aaKnown RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 RPL30P62888 115 aaKnown RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 BATFQ16520 125 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 PTRHD1Q6GMV3 140 aaKnown RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 OPTNQ96CV9 577 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 TMA16Q96EY4 203 aaKnown RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 SPZ1Q9BXG8 430 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 RPL26L1Q9UNX3 145 aaKnown RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 A2ML1A8K2U0 1454 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 PZPP20742 1482 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 IQSEC2Q5JU85 1478 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 NLRP1Q9C000 1473 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 C3P01024 1663 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 STRCQ7RTU9 1775 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 ZNF532Q9HCE3 1301 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 ZFYVE9O95405 1425 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 NAIPQ13075 1403 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 NCOA3Q9Y6Q9 1424 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 MROH1Q8NDA8 1641 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 MADDQ8WXG6 1647 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 PTPN23Q9H3S7 1636 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 A0A1B0GVG6 124 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 TMEM269A0A1B0GVZ9 245 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 ZNF705FA8MVS1 300 aaPredicted RBP1.92□□□□□ -2.1
SYNE2-210ENST00000553455 DCTN3O75935 186 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 NSA2O95478 260 aaKnown RBP1.92□□□□□ -2.1
SYNE2-210ENST00000553455 CALB1P05937 261 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 ALDH3A1P30838 453 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 CA5AP35218 305 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 RAB5BP61020 215 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 OR1L8Q8NGR8 309 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 LHFPL5Q8TAF8 219 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 AK3Q9UIJ7 227 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 TET3O43151 1660 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 DOCK10Q96BY6 2186 aa1.92□□□□□ -2.1
SYNE2-210ENST00000553455 HFM1A2PYH4 1435 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 ANKRD50Q9ULJ7 1429 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 ABCC3O15438 1527 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 SLIT1O75093 1534 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 PRDM15P57071 1507 aaPredicted RBP1.91□□□□□ -2.1
SYNE2-210ENST00000553455 EFCAB6Q5THR3 1501 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 ZC3H13Q5T200 1668 aaKnown RBP1.91□□□□□ -2.1
SYNE2-210ENST00000553455 PREX1Q8TCU6 1659 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 IGHV3-64A0A075B6Q5 118 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.91□□□□□ -2.1
SYNE2-210ENST00000553455 TFPTP0C1Z6 253 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 UCHL3P15374 230 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 IDH3GP51553 393 aaPredicted RBP1.91□□□□□ -2.1
SYNE2-210ENST00000553455 RAP1GDS1P52306 607 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 ERHP84090 104 aaKnown RBP1.91□□□□□ -2.1
SYNE2-210ENST00000553455 FABP9Q0Z7S8 132 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 LPCAT4Q643R3 524 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 ALKAL1Q6UXT8 129 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 IMMP2LQ96T52 175 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 VCX3BQ9H321 246 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 GUCA1BQ9UMX6 200 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 UHRF1BP1Q6BDS2 1440 aa1.91□□□□□ -2.1
SYNE2-210ENST00000553455 CROCC2H7BZ55 1655 aa1.9□□□□□ -2.1
SYNE2-210ENST00000553455 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.1
SYNE2-210ENST00000553455 RIMS1Q86UR5 1692 aaKnown RBP1.9□□□□□ -2.1
SYNE2-210ENST00000553455 UNC13BO14795 1591 aa1.9□□□□□ -2.1
SYNE2-210ENST00000553455 ERVK-7P63135 1459 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 NUP155O75694 1391 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 TMEM2Q9UHN6 1383 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 A0A0J9YW62 118 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 ZNF860A6NHJ4 632 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 INMT-MINDY4F8WBC2 141 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 FAM201AQ5SY85 155 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 LYZL1Q6UWQ5 148 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
SYNE2-210ENST00000553455 SSX8Q7RTT4 187 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 OR2T4Q8NH00 348 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 ZNF625Q96I27 306 aaPredicted RBP1.9□□□□□ -2.11
SYNE2-210ENST00000553455 MRPS26Q9BYN8 205 aaKnown RBP1.9□□□□□ -2.11
SYNE2-210ENST00000553455 ANGPT4Q9Y264 503 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 PIK3C2BO00750 1634 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 IQGAP3Q86VI3 1631 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 SETD5Q9C0A6 1442 aa1.9□□□□□ -2.11
SYNE2-210ENST00000553455 CLTCQ00610 1675 aaKnown RBP1.9□□□□□ -2.11
SYNE2-210ENST00000553455 UGGT1Q9NYU2 1555 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 UBR1Q8IWV7 1749 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 H3BT86 120 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 AHSA1O95433 338 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 LGALS1P09382 135 aaKnown RBP1.89□□□□□ -2.11
SYNE2-210ENST00000553455 HIST1H1EP10412 219 aaKnown RBP1.89□□□□□ -2.11
SYNE2-210ENST00000553455 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
SYNE2-210ENST00000553455 POLR2GP62487 172 aaKnown RBP eCLIP1.89□□□□□ -2.11
SYNE2-210ENST00000553455 AKR1C1Q04828 323 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 IMPG1Q17R60 797 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 LRRC28Q86X40 367 aaPredicted RBP1.89□□□□□ -2.11
SYNE2-210ENST00000553455 TMEM86BQ8N661 226 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 OR1M1Q8NGA1 313 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 OR51D1Q8NGF3 324 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 FAM135BQ49AJ0 1406 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 GCC2Q8IWJ2 1684 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 MALRD1Q5VYJ5 2156 aa1.89□□□□□ -2.11
SYNE2-210ENST00000553455 CEP170BQ9Y4F5 1589 aaPredicted RBP1.89□□□□□ -2.11
SYNE2-210ENST00000553455 NRXN1Q9ULB1 1477 aa1.88□□□□□ -2.11
SYNE2-210ENST00000553455 TMEM131LA2VDJ0 1609 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms