RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 OR4B1Q8NGF8 309 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 DDB2Q92466 427 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 FBXL7Q9UJT9 491 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 SLC45A2Q9UMX9 530 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 ACTL6BO94805 426 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 CA2P00918 260 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 CRYABP02511 175 aaKnown RBP14.45□□□□□ -0.1
SYNE3-202ENST00000553340 RNF2Q99496 336 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PPP1R14DQ9NXH3 145 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 FOXA2Q9Y261 457 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-202ENST00000553340 IGKV1D-17A0A075B6S4 117 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 F2RL2O00254 374 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 COL8A2P25067 703 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 CRYBB3P26998 211 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 BATFQ16520 125 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 OR10J3Q5JRS4 329 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 PQLC2Q6ZP29 291 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 CNEP1R1Q8N9A8 125 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 LPAR2Q9HBW0 351 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 TMEM265A0A087WTH1 108 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 DIRC3C9JPN6 131 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 TIGITQ495A1 244 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 OR4A47Q6IF82 309 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 DOLPP1Q86YN1 238 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 OSTCQ9NRP0 149 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 TMEM14BQ9NUH8 114 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 CLCF1Q9UBD9 225 aa14.44□□□□□ -0.1
SYNE3-202ENST00000553340 TBL2Q9Y4P3 447 aaKnown RBP14.44□□□□□ -0.1
SYNE3-202ENST00000553340 DMDP11532 3685 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 FNDC10F2Z333 226 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 SPINK4O60575 86 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 CECR9P0C854 216 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 LINC00869P0C866 280 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 TMEM178AQ8NBL3 297 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 NEUROG1Q92886 237 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 TRIB1Q96RU8 372 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 URB1O60287 2271 aaKnown RBP14.43□□□□□ -0.1
SYNE3-202ENST00000553340 NPSP0C0P6 89 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 AMTP48728 403 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 RAB7AP51149 207 aa14.43□□□□□ -0.1
SYNE3-202ENST00000553340 SAA2-SAA4A0A096LPE2 208 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 SRRM5B3KS81 715 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 OR5G3P0C626 314 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 TMEM136Q6ZRR5 245 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 OR2Z1Q8NG97 314 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 NABP2Q9BQ15 211 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 RNASE7Q9H1E1 156 aaKnown RBP14.42□□□□□ -0.1
SYNE3-202ENST00000553340 NRN1Q9NPD7 142 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 TECRQ9NZ01 308 aaKnown RBP14.42□□□□□ -0.1
SYNE3-202ENST00000553340 MBNL2Q5VZF2 373 aaKnown RBP14.42□□□□□ -0.1
SYNE3-202ENST00000553340 C1orf229Q6ZS94 237 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-202ENST00000553340 KCNS1Q96KK3 526 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 CALYQ9NYX4 217 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 RNF114Q9Y508 228 aa14.42□□□□□ -0.1
SYNE3-202ENST00000553340 LINC00614P0C842 121 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 Q8N976 141 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 C1orf162Q8NEQ5 155 aaPredicted RBP14.41□□□□□ -0.1
SYNE3-202ENST00000553340 ISLRO14498 428 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 ZNF253O75346 499 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 ZNF883P0CG24 379 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 SUMO1P63165 101 aaKnown RBP14.41□□□□□ -0.1
SYNE3-202ENST00000553340 FXYD3Q14802 87 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 KIAA1644Q3SXP7 199 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 COL5A1-AS1Q5SY13 56 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 C1orf174Q8IYL3 243 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 ZNRF1Q8ND25 227 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 PLEKHA3Q9HB20 300 aa14.41□□□□□ -0.1
SYNE3-202ENST00000553340 ITGB1BP1O14713 200 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 SLC35B1P78383 322 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 LEAP2Q969E1 77 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 IDI2-AS1Q9NZ38 188 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 IGHV3OR15-7A0A075B7D8 119 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 A0A1W2PS18 150 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 AHRRA9YTQ3 701 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 OR7C2O60412 319 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 PMCHP20382 165 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 C1orf210Q8IVY1 113 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 RBM14Q96PK6 669 aaKnown RBP14.4□□□□□ -0.1
SYNE3-202ENST00000553340 OR51B2Q9Y5P1 312 aa14.4□□□□□ -0.1
SYNE3-202ENST00000553340 HLA-DQA1P01909 254 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 AMY1AP04745 511 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 SAA2P0DJI9 122 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-202ENST00000553340 TCL1AP56279 114 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 TAS2R45P59539 299 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 GUSBP1Q15486 140 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 SPATA45Q537H7 98 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-202ENST00000553340 SLC35E1Q96K37 410 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 RCHY1Q96PM5 261 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 GCM1Q9NP62 436 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 IGHV2OR16-5A0A0B4J2B6 119 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 SRIP30626 198 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 CTRLP40313 264 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 CT45A1Q5HYN5 189 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 IBA57Q5T440 356 aaKnown RBP14.39□□□□□ -0.11
SYNE3-202ENST00000553340 GCSAMQ8N6F7 178 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 CT45A3Q8NHU0 189 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 RAB9BQ9NP90 201 aa14.39□□□□□ -0.11
SYNE3-202ENST00000553340 MYOD1P15172 320 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms