RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 TMEM183BQ1AE95 376 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 MORN2Q502X0 79 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 SPRNQ5BIV9 151 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 MOB3BQ86TA1 216 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 OR8I2Q8N0Y5 310 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 OR5AU1Q8NGC0 362 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 OR1L6Q8NGR2 347 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 LEAP2Q969E1 77 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 EAF1Q96JC9 268 aaPredicted RBP4.46□□□□□ -1.7
LIMA1-212ENST00000552491 LRFN3Q9BTN0 628 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TCF19Q9Y242 345 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TRGV10A0A0A0MS01 117 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TRBV9A0A0B4J1U6 114 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 SNURFLB1AK76 121 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 FCN1O00602 326 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 DLEU1O43261 78 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 ACTL6BO94805 426 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 MT-CO2P00403 227 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 CRYABP02511 175 aaKnown RBP4.46□□□□□ -1.7
LIMA1-212ENST00000552491 IGFBP2P18065 325 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TFPI2P48307 235 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 FABP6P51161 128 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 LOXL3P58215 753 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 ARG2P78540 354 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TRAT1Q6PIZ9 186 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 MIR17HGQ75NE6 70 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 BAGE3Q86Y29 109 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 BAGE2Q86Y30 109 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 DOLPP1Q86YN1 238 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 OR4P4Q8NGL7 312 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 RCHY1Q96PM5 261 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 CXXC4Q9H2H0 198 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 IFI27L2Q9H2X8 130 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 GNB4Q9HAV0 340 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 LPAR2Q9HBW0 351 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TMEM140Q9NV12 185 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 GNG12Q9UBI6 72 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 PPIAL4AQ9Y536 164 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 YLPM1P49750 1951 aaKnown RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 CACNA1GO43497 2377 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 IGKV1D-17A0A075B6S4 117 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 TRGV5A0A0B4J1U4 118 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 KLRC4-KLRK1H3BQV0 150 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 LINC00869P0C866 280 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 AREGP15514 252 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 GATA2P23769 480 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 RHOBP62745 196 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 FXYD3Q14802 87 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 BATFQ16520 125 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 MSMPQ1L6U9 139 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 RPEL1Q2QD12 228 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 FAM216AQ8WUB2 273 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 DDB2Q92466 427 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 UHRF2Q96PU4 802 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 FAM103A1Q9BTL3 118 aaKnown RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 VAMP8Q9BV40 100 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 GNB1LQ9BYB4 327 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 RNASE7Q9H1E1 156 aaKnown RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 KLF13Q9Y2Y9 288 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 GOLT1BQ9Y3E0 138 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 PLCE1Q9P212 2302 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 IGHV3OR15-7A0A075B7D8 119 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 TRGV8A0A0C4DH27 118 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 CA2P00918 260 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 GPX1P07203 203 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 CRYBB3P26998 211 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 PRDX2P32119 198 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 TCL1AP56279 114 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 ERVK-16P61578 105 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 RPL19P84098 196 aaKnown RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 SMIM21Q3B7S5 101 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 CENPWQ5EE01 88 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 INO80CQ6PI98 192 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 TEPPQ6URK8 271 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 FAM214BQ7L5A3 538 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 ZNRF1Q8ND25 227 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 LRRC29Q8WV35 223 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 SFXN3Q9BWM7 321 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 SAMD10Q9BYL1 202 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 OPN3Q9H1Y3 402 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-212ENST00000552491 DUSP13Q9UII6 198 aa4.45□□□□□ -1.7
LIMA1-212ENST00000552491 CUL9Q8IWT3 2517 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 TIMM8AO60220 97 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 IGKV3-15P01624 115 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 IGLV2-8P01709 118 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 MT-ND6P03923 174 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 OR10J4P0C629 311 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CECR9P0C854 216 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CTRLP40313 264 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 KRTDAPP60985 99 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 MRPS11P82912 194 aaKnown RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 RAB31Q13636 194 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms