RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 RNF152Q8N8N0 203 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 C11orf44Q8N8P7 122 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 OR5T1Q8NG75 326 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 FAM110DQ8TAY7 271 aaPredicted RBP16.79■□□□□ 0.28
NEK3-202ENST00000550841 NDUFA4L2Q9NRX3 87 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 TSSC4Q9Y5U2 329 aaPredicted RBP16.79■□□□□ 0.28
NEK3-202ENST00000550841 NBEAL1Q6ZS30 2694 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 A0A1B0GU03 582 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 TEX22C9J3V5 150 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 E7EUB6 86 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 INMT-MINDY4F8WBC2 141 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 BRI3O95415 125 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 PTTG1O95997 202 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 DHFRP00374 187 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 IFNA21P01568 189 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 SULT1A3P0DMM9 295 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 SULT1A4P0DMN0 295 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 PF4V1P10720 104 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 MYOD1P15172 320 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 PSMB8P28062 276 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 SRSF4Q08170 494 aaKnown RBP16.78■□□□□ 0.28
NEK3-202ENST00000550841 IZUMO4Q1ZYL8 232 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 ASPHD1Q5U4P2 390 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 ZNF431Q8TF32 576 aaPredicted RBP16.78■□□□□ 0.28
NEK3-202ENST00000550841 MITD1Q8WV92 249 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 MARVELD1Q9BSK0 173 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 HINT2Q9BX68 163 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 SLA2Q9H6Q3 261 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 GPN1Q9HCN4 374 aaPredicted RBP16.78■□□□□ 0.28
NEK3-202ENST00000550841 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 COA4Q9NYJ1 87 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 ANK2Q01484 3957 aa16.78■□□□□ 0.28
NEK3-202ENST00000550841 A0A0G2JRQ6 117 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 HMX3A6NHT5 357 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 NPIPB5A8MRT5 1133 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 PRAF2O60831 178 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 IFNA17P01571 189 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 SLC25A6P12236 298 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 RAB9AP51151 201 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 SMCO1Q147U7 214 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 NMSQ5H8A3 153 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 NDUFA11Q86Y39 141 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 OR52E5Q8NH55 327 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 CITED2Q99967 270 aaPredicted RBP16.77■□□□□ 0.28
NEK3-202ENST00000550841 CACNG5Q9UF02 275 aa16.77■□□□□ 0.28
NEK3-202ENST00000550841 CGB1A6NKQ9 187 aa16.76■□□□□ 0.27
NEK3-202ENST00000550841 APELAP0DMC3 54 aa16.76■□□□□ 0.27
NEK3-202ENST00000550841 PSMB6P28072 239 aa16.76■□□□□ 0.27
NEK3-202ENST00000550841 TCTEX1D4Q5JR98 221 aa16.76■□□□□ 0.27
NEK3-202ENST00000550841 Q6ZRM9 215 aa16.76■□□□□ 0.27
NEK3-202ENST00000550841 A0A1B0GW64 132 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 DBX1A6NMT0 343 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 CYB5BO43169 146 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 ST8SIA3O43173 380 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 SOX15O60248 233 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 CRYGCP07315 174 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 HOXB5P09067 269 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 SPCS3P61009 180 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 PRCDQ00LT1 54 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 AARDQ4LEZ3 155 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 KHDC1LQ5JSQ8 128 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 OR52B4Q8NGK2 314 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 SEC22CQ9BRL7 303 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 ENY2Q9NPA8 101 aa16.75■□□□□ 0.27
NEK3-202ENST00000550841 IGLC7A0M8Q6 106 aa16.74■□□□□ 0.27
NEK3-202ENST00000550841 RPLP1P05386 114 aaKnown RBP16.74■□□□□ 0.27
NEK3-202ENST00000550841 OR13C7P0DN81 318 aa16.74■□□□□ 0.27
NEK3-202ENST00000550841 ERHP84090 104 aaKnown RBP16.74■□□□□ 0.27
NEK3-202ENST00000550841 GGNBP1Q5YKI7 109 aa16.74■□□□□ 0.27
NEK3-202ENST00000550841 C12orf45Q8N5I9 185 aaPredicted RBP16.74■□□□□ 0.27
NEK3-202ENST00000550841 PLEKHA3Q9HB20 300 aa16.74■□□□□ 0.27
NEK3-202ENST00000550841 A0A0G2JLM5 398 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 SNRPGP15A8MWD9 76 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 TRGV3P03979 118 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 DEFA4P12838 97 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 AREGP15514 252 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 HIST1H1BP16401 226 aaKnown RBP16.73■□□□□ 0.27
NEK3-202ENST00000550841 CTRB1P17538 263 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 CDX1P47902 265 aaPredicted RBP16.73■□□□□ 0.27
NEK3-202ENST00000550841 RPL23AP62750 156 aaKnown RBP16.73■□□□□ 0.27
NEK3-202ENST00000550841 RGS21Q2M5E4 152 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 CTRB2Q6GPI1 263 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 OR10W1Q8NGF6 305 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 OR1L6Q8NGR2 347 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 OR1S1Q8NH92 325 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 UBE2E2Q96LR5 201 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 MS4A10Q96PG2 267 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 KLK15Q9H2R5 256 aa16.73■□□□□ 0.27
NEK3-202ENST00000550841 TET2Q6N021 2002 aaPredicted RBP16.73■□□□□ 0.27
NEK3-202ENST00000550841 INS-IGF2F8WCM5 200 aa16.72■□□□□ 0.27
NEK3-202ENST00000550841 M0QZ24 198 aa16.72■□□□□ 0.27
NEK3-202ENST00000550841 TPPP2P59282 170 aa16.72■□□□□ 0.27
NEK3-202ENST00000550841 PDLIM3Q53GG5 364 aaPredicted RBP16.72■□□□□ 0.27
NEK3-202ENST00000550841 UXS1Q8NBZ7 420 aa16.72■□□□□ 0.27
NEK3-202ENST00000550841 USMG5Q96IX5 58 aa16.72■□□□□ 0.27
NEK3-202ENST00000550841 WT1-ASQ06250 92 aa16.71■□□□□ 0.27
NEK3-202ENST00000550841 C2orf68Q2NKX9 166 aa16.71■□□□□ 0.27
NEK3-202ENST00000550841 NSUN5P1Q3KNT7 163 aa16.71■□□□□ 0.27
NEK3-202ENST00000550841 ZNF491Q8N8L2 437 aa16.71■□□□□ 0.27
NEK3-202ENST00000550841 MYOZ3Q8TDC0 251 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms