RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 KLF14Q8TD94 323 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-228ENST00000548938 NPVFQ9HCQ7 196 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 DNAJC4Q9NNZ3 241 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 TCF19Q9Y242 345 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 ZFP30Q9Y2G7 519 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 LY96Q9Y6Y9 160 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 SPINT2O43291 252 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 ACTL6BO94805 426 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 TNFSF15O95150 251 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 GNG4P50150 75 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 WDR82Q6UXN9 313 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 MIR17HGQ75NE6 70 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 A0A1W2PS18 150 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 TCF21O43680 179 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 ERVK-16P61578 105 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 SUMO1P63165 101 aaKnown RBP11.32□□□□□ -0.6
HDAC7-228ENST00000548938 PQLC2Q6ZP29 291 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 STPG4Q8N801 248 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
HDAC7-228ENST00000548938 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 C21orf140B9A014 251 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 MT-CO2P00403 227 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 CRYBB3P26998 211 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 CX3CL1P78423 397 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 PIP4P1Q86T03 277 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 OR52E5Q8NH55 327 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 PRR7Q8TB68 274 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 CNOT1A5YKK6 2376 aaKnown RBP11.31□□□□□ -0.6
HDAC7-228ENST00000548938 AHRRA9YTQ3 701 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 ZNF253O75346 499 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 LYZL6O75951 148 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 IGFBP2P18065 325 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 ZNF83P51522 516 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 FZR1Q9UM11 496 aa11.31□□□□□ -0.6
HDAC7-228ENST00000548938 ZNF891A8MT65 544 aaPredicted RBP11.3□□□□□ -0.6
HDAC7-228ENST00000548938 HYPMO75409 117 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 NDUFB8O95169 186 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 ADH4P08319 380 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 IGLC2P0DOY2 106 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 IGLC3P0DOY3 106 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 SRIP30626 198 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 MEOX1P50221 254 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 PSG5Q15238 335 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 MRPL54Q6P161 138 aaKnown RBP11.3□□□□□ -0.6
HDAC7-228ENST00000548938 DSPP15924 2871 aaKnown RBP11.3□□□□□ -0.6
HDAC7-228ENST00000548938 PRR14LQ5THK1 2151 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 HELTA6NFD8 242 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 BMPR1BO00238 502 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 MT-ND6P03923 174 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 FAM122AQ96E09 287 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 TXN2Q99757 166 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 DEFB127Q9H1M4 99 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
HDAC7-228ENST00000548938 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.29□□□□□ -0.6
HDAC7-228ENST00000548938 LOC400499M0QZD8 3231 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 AREGP15514 252 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 IGHV1-2P23083 117 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 NPY1RP25929 384 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 RIF1Q5UIP0 2472 aaKnown RBP11.29□□□□□ -0.6
HDAC7-228ENST00000548938 Q6ZN92 141 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 NIT1Q86X76 327 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 FAM19A2Q8N3H0 131 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 SLC24A4Q8NFF2 622 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
HDAC7-228ENST00000548938 OR10J4P0C629 311 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 MYOD1P15172 320 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 ZNF134P52741 427 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 PRR20EP86478 221 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 PRR20CP86479 221 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 PRR20DP86480 221 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 PRR20BP86481 221 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 PRR20AP86496 221 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 SMIM21Q3B7S5 101 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 MORN2Q502X0 79 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 GCNT2Q8N0V5 402 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 DEFB124Q8NES8 71 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 TRGV8A0A0C4DH27 118 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 CA2P00918 260 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 OR5G3P0C626 314 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 HNRNPA3P51991 378 aaKnown RBP11.29□□□□□ -0.6
HDAC7-228ENST00000548938 UTF1Q5T230 341 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
HDAC7-228ENST00000548938 ATOH7Q8N100 152 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms