RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ZNF320A2RRD8 509 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 CTDSPLO15194 276 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 RAB3DO95716 219 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 CD3DP04234 171 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 PGAM2P15259 253 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 TBPP20226 339 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 KIR2DS2P43631 304 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SSBP1Q04837 148 aaKnown RBP8.64□□□□□ -1.03
RAB5C-203ENST00000546881 ZNF79Q15937 498 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SCGB2B2Q4G0G5 96 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 STEAP1BQ6NZ63 245 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 ZNF66Q6ZN08 573 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SLC16A13Q7RTY0 426 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 CMTM1Q8IZ96 169 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 ZBTB34Q8NCN2 500 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SMIM4Q8WVI0 70 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SDHCQ99643 169 aaPredicted RBP8.64□□□□□ -1.03
RAB5C-203ENST00000546881 SOSTQ9BQB4 213 aa8.64□□□□□ -1.03
RAB5C-203ENST00000546881 TECRQ9NZ01 308 aaKnown RBP8.64□□□□□ -1.03
RAB5C-203ENST00000546881 DISC1C4P0D8 188 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 ARL3P36405 182 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 RPL27AP46776 148 aaKnown RBP8.63□□□□□ -1.03
RAB5C-203ENST00000546881 INPP1P49441 399 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 RPL30P62888 115 aaKnown RBP8.63□□□□□ -1.03
RAB5C-203ENST00000546881 MEF2DQ14814 521 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 LPCAT3Q6P1A2 487 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 DHRS11Q6UWP2 260 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 CLEC19AQ6UXS0 136 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 ZNF818PQ6ZRF7 136 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 OR52B4Q8NGK2 314 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 OR51H1Q8NH63 302 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 OR4S2Q8NH73 311 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 GPHA2Q96T91 129 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 FXYD6Q9H0Q3 95 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 ZNF257Q9Y2Q1 563 aa8.63□□□□□ -1.03
RAB5C-203ENST00000546881 TEX22C9J3V5 150 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 GPR31O00270 319 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 SCAF4O95104 1147 aaKnown RBP8.62□□□□□ -1.03
RAB5C-203ENST00000546881 NDUFB8O95169 186 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 IGLV2-14P01704 120 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 RLN1P04808 185 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 AKAIN1P0CW23 69 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 CBLN1P23435 193 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 PPP5CP53041 499 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 PMS2P11Q13670 270 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 MSMO1Q15800 293 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 PHLDA2Q53GA4 152 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 FAM209BQ5JX69 171 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 ZNF57Q68EA5 555 aaPredicted RBP8.62□□□□□ -1.03
RAB5C-203ENST00000546881 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 SPAG16Q8N0X2 631 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 ARRDC1Q8N5I2 433 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 OR2A7Q96R45 310 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 SRRQ9GZT4 340 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 ZC4H2Q9NQZ6 224 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 MCUBQ9NWR8 336 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 ALMS1Q8TCU4 4167 aa8.62□□□□□ -1.03
RAB5C-203ENST00000546881 NPIPB5A8MRT5 1133 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 LGALS9O00182 355 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
RAB5C-203ENST00000546881 KBTBD11O94819 623 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 DHFRP00374 187 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 REG1AP05451 166 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 IL6RP08887 468 aaPredicted RBP8.61□□□□□ -1.03
RAB5C-203ENST00000546881 DEFA4P12838 97 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 AREGP15514 252 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 PTBP1P26599 531 aaKnown RBP eCLIP8.61□□□□□ -1.036e-22■■■■■ 138.4
RAB5C-203ENST00000546881 FAUP35544 74 aaKnown RBP8.61□□□□□ -1.03
RAB5C-203ENST00000546881 AP3S2P59780 193 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 IFITM3Q01628 133 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 FAM106AQ4KMX7 169 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 FAAP20Q6NZ36 180 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 UXS1Q8NBZ7 420 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 OR4D10Q8NGI6 311 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 VSTM2AQ8TAG5 236 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 EEF1AKMT3Q96AZ1 226 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 CCDC140Q96MF4 163 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 CCDC32Q9BV29 185 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 GGTLC1Q9BX51 225 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 MLXQ9UH92 298 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 DMRT1Q9Y5R6 373 aa8.61□□□□□ -1.03
RAB5C-203ENST00000546881 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
RAB5C-203ENST00000546881 LOC102724200A0A096LPH7 203 aaPredicted RBP8.6□□□□□ -1.03
RAB5C-203ENST00000546881 CXorf65A6NEN9 183 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 E7EUB6 86 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 UPK1BO75841 260 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 LY6G6CO95867 125 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 HRASP01112 189 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 CD74P04233 296 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 MYOD1P15172 320 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 PSMB6P28072 239 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 GNRHRP30968 328 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 ERVK-16P61578 105 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 TRIQKQ629K1 86 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms