RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 ACOT6Q3I5F7 207 aaPredicted RBP2.31□□□□□ -2.04
LEMD3-206ENST00000545026 TMEM155Q4W5P6 130 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 Q6ZS49 121 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 TRAPPC5Q8IUR0 188 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 ZNF676Q8N7Q3 588 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 HSPB9Q9BQS6 159 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 WDR61Q9GZS3 305 aaKnown RBP2.31□□□□□ -2.04
LEMD3-206ENST00000545026 UCK1Q9HA47 277 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 RGS12O14924 1447 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
LEMD3-206ENST00000545026 NUMA1Q14980 2115 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 GGT3PA6NGU5 568 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 CLDN24A6NM45 220 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 PSMD12O00232 456 aaPredicted RBP2.3□□□□□ -2.04
LEMD3-206ENST00000545026 ZNF737O75373 536 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 PRM2P04554 102 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 GPX1P07203 203 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 SULT1A3P0DMM9 295 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 SULT1A4P0DMN0 295 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 HIST1H1TP22492 207 aaPredicted RBP2.3□□□□□ -2.04
LEMD3-206ENST00000545026 AQP4P55087 323 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 FAM27BQ5VT28 67 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 C20orf196Q8IYI0 205 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 CLDN22Q8N7P3 220 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 ZNF565Q8N9K5 539 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 PPP1R2P1Q96PQ5 205 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 C8orf4Q9NR00 106 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 PKIGQ9Y2B9 76 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 SCAF11Q99590 1463 aaKnown RBP2.3□□□□□ -2.04
LEMD3-206ENST00000545026 TRIOBPQ9H2D6 2365 aa2.3□□□□□ -2.04
LEMD3-206ENST00000545026 WRNQ14191 1432 aaPredicted RBP eCLIP2.29□□□□□ -2.04
LEMD3-206ENST00000545026 KPNA3O00505 521 aaPredicted RBP2.29□□□□□ -2.04
LEMD3-206ENST00000545026 RPP14O95059 124 aaKnown RBP2.29□□□□□ -2.04
LEMD3-206ENST00000545026 OMPP47874 163 aa2.29□□□□□ -2.04
LEMD3-206ENST00000545026 PSME3P61289 254 aa2.29□□□□□ -2.04
LEMD3-206ENST00000545026 LSM6P62312 80 aaKnown RBP2.29□□□□□ -2.04
LEMD3-206ENST00000545026 CCL20P78556 96 aa2.29□□□□□ -2.04
LEMD3-206ENST00000545026 COA5Q86WW8 74 aa2.29□□□□□ -2.04
LEMD3-206ENST00000545026 OR5B17Q8NGF7 314 aa2.29□□□□□ -2.04
LEMD3-206ENST00000545026 MRPL30Q8TCC3 161 aaKnown RBP2.29□□□□□ -2.04
LEMD3-206ENST00000545026 PPP1R14BQ96C90 147 aa2.29□□□□□ -2.04
LEMD3-206ENST00000545026 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 GOLGA6L19H0YKK7 550 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 CIAO1O76071 339 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 CDKN2CP42773 168 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 SNRPD2P62316 118 aaKnown RBP2.28□□□□□ -2.04
LEMD3-206ENST00000545026 AESQ08117 197 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 SLC36A1Q7Z2H8 476 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 LRRC25Q8N386 305 aaPredicted RBP2.28□□□□□ -2.04
LEMD3-206ENST00000545026 MRPL27Q9P0M9 148 aaKnown RBP2.28□□□□□ -2.04
LEMD3-206ENST00000545026 DOK5Q9P104 306 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 PTPRSQ13332 1948 aa2.28□□□□□ -2.04
LEMD3-206ENST00000545026 MTUS2Q5JR59 1369 aa2.27□□□□□ -2.05
LEMD3-206ENST00000545026 HLA-DRB1P01911 266 aa2.27□□□□□ -2.05
LEMD3-206ENST00000545026 TCRBP04435 133 aa2.27□□□□□ -2.05
LEMD3-206ENST00000545026 RANP62826 216 aaKnown RBP2.27□□□□□ -2.05
LEMD3-206ENST00000545026 IBA57Q5T440 356 aaKnown RBP2.27□□□□□ -2.05
LEMD3-206ENST00000545026 IGKV1D-43A0A0B4J1Z2 117 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 TRBV10-2A0A0K0K1G8 114 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 IRGMA1A4Y4 181 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 MEIS3P1A6NDR6 274 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 FABP5P3A8MUU1 101 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 FAAHO00519 579 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 SLC22A1O15245 554 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 IGKV1-5P01602 117 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 PRB1P04280 392 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 S100A6P06703 90 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 RPL5P46777 297 aaKnown RBP2.26□□□□□ -2.05
LEMD3-206ENST00000545026 AADACL3Q5VUY0 350 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 TMEM86AQ8N2M4 240 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 C8orf76Q96K31 380 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 DERL1Q9BUN8 251 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 PRTFDC1Q9NRG1 225 aa2.26□□□□□ -2.05
LEMD3-206ENST00000545026 CPAMD8Q8IZJ3 1885 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 MUC6Q6W4X9 2439 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 PQLC2LA1A4F0 135 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 TRGC1P0CF51 173 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 SUPT4H1P63272 117 aaKnown RBP2.25□□□□□ -2.05
LEMD3-206ENST00000545026 KCNJ8Q15842 424 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 ZNF563Q8TA94 476 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 DCUN1D1Q96GG9 259 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.25□□□□□ -2.05
LEMD3-206ENST00000545026 FBXL12Q9NXK8 326 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
LEMD3-206ENST00000545026 RTTNQ86VV8 2226 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 GPX2P18283 190 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 RPS20P60866 119 aaKnown RBP2.24□□□□□ -2.05
LEMD3-206ENST00000545026 HBA1P69905 142 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 KISS1Q15726 138 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 LPCAT3Q6P1A2 487 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 C7orf65Q6ZTY9 151 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 TSPAN32Q96QS1 320 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 OR51V1Q9H2C8 321 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 OTOGLQ3ZCN5 2332 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 RALGAPA2Q2PPJ7 1873 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 ZFYVE9O95405 1425 aa2.24□□□□□ -2.05
LEMD3-206ENST00000545026 KIF24Q5T7B8 1368 aa2.23□□□□□ -2.05
LEMD3-206ENST00000545026 PTPRBP23467 1997 aa2.23□□□□□ -2.05
LEMD3-206ENST00000545026 TRGV2A0A075B6R0 118 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms