RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 IGHV3-21A0A0B4J1V1 117 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 WI2-2373I1.2A0A1W2PRP0 233 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 FAM223BA6NKX1 122 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 NPIPB5A8MRT5 1133 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 CTSDP07339 412 aaPredicted RBP8.51□□□□□ -1.05
DDB1-222ENST00000543627 ZP3P21754 424 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 SYNJ2BPP57105 145 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 POU2AF1Q16633 256 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 SPINK9Q5DT21 86 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 SPANXN2Q5MJ10 180 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 REC114Q7Z4M0 266 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 FAM223AQ8IWN6 122 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 PRR25Q96S07 402 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 PRRT1Q99946 306 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 ELOVL1Q9BW60 279 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 PRNDQ9UKY0 176 aa8.51□□□□□ -1.05
DDB1-222ENST00000543627 PPP5D1E7EU14 171 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 ZNF701M0R085 212 aaPredicted RBP8.5□□□□□ -1.05
DDB1-222ENST00000543627 IGKV1-39P01597 117 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 HLA-AP01891 365 aaKnown RBP8.5□□□□□ -1.05
DDB1-222ENST00000543627 IGKV1D-39P04432 117 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 OR5AC1P0C628 307 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 AKR1C4P17516 323 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 CTRB1P17538 263 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 FAUP35544 74 aaKnown RBP8.5□□□□□ -1.05
DDB1-222ENST00000543627 RND3P61587 244 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 CTRB2Q6GPI1 263 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 ZNF343Q6P1L6 599 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 CLEC19AQ6UXS0 136 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 HAPLN4Q86UW8 402 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 NECAP1Q8NC96 275 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 RRNAD1Q96FB5 475 aaKnown RBP8.5□□□□□ -1.05
DDB1-222ENST00000543627 SEC22AQ96IW7 307 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 TMEM56Q96MV1 263 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 TSC22D3Q99576 134 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 SOSTQ9BQB4 213 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 RTBDNQ9BSG5 229 aaPredicted RBP8.5□□□□□ -1.05
DDB1-222ENST00000543627 FKBP11Q9NYL4 201 aa8.5□□□□□ -1.05
DDB1-222ENST00000543627 IGLC7A0M8Q6 106 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 DBX1A6NMT0 343 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 H0Y980 276 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 ATG12O94817 140 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 IFNA17P01571 189 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 CRYGCP07315 174 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 HIST1H1BP16401 226 aaKnown RBP8.49□□□□□ -1.05
DDB1-222ENST00000543627 AP3S2P59780 193 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 TMED4Q7Z7H5 227 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 SGPP2Q8IWX5 399 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 LSM10Q969L4 123 aaKnown RBP8.49□□□□□ -1.05
DDB1-222ENST00000543627 EEF1AKMT3Q96AZ1 226 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 SCGB3A2Q96PL1 93 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 FANCD2OSQ96PS1 177 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 PDCD10Q9BUL8 212 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 C5orf66Q9H5L9 145 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 NDUFA13Q9P0J0 144 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 ZMAT5Q9UDW3 170 aaKnown RBP8.49□□□□□ -1.05
DDB1-222ENST00000543627 GPR132Q9UNW8 380 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 V9GYH0 126 aa8.49□□□□□ -1.05
DDB1-222ENST00000543627 TRBV9A0A0B4J1U6 114 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 C15orf61A6NNL5 157 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 K7EIL1 84 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 CYB5BO43169 146 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 OR2C1O95371 312 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 ARL3P36405 182 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 WT1-ASQ06250 92 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 ZNF79Q15937 498 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 TMEM268Q5VZI3 342 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 TRIQKQ629K1 86 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 ZNF429Q86V71 674 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 UBAC2Q8NBM4 344 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 OR6Q1Q8NGQ2 317 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 NAA60Q9H7X0 242 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 FAM212BQ9NTI7 297 aaPredicted RBP8.48□□□□□ -1.05
DDB1-222ENST00000543627 THYN1Q9P016 225 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 KCNIP3Q9Y2W7 256 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 SELENOKQ9Y6D0 94 aa8.48□□□□□ -1.05
DDB1-222ENST00000543627 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.47□□□□□ -1.05
DDB1-222ENST00000543627 IGHV3-35A0A0C4DH35 117 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 MFSD2BA6NFX1 497 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 BMPR1BO00238 502 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 NXPH3O95157 252 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 BRI3O95415 125 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 IGKV1-5P01602 117 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 CLEC3BP05452 202 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 PTBP1P26599 531 aaKnown RBP eCLIP8.47□□□□□ -1.05
DDB1-222ENST00000543627 ETV6P41212 452 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 INSL3P51460 131 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 HSPE1P61604 102 aaKnown RBP8.47□□□□□ -1.05
DDB1-222ENST00000543627 ERHP84090 104 aaKnown RBP8.47□□□□□ -1.05
DDB1-222ENST00000543627 DHODHQ02127 395 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 EGFEM1PQ0D2K5 195 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 KLF9Q13886 244 aaPredicted RBP8.47□□□□□ -1.05
DDB1-222ENST00000543627 KLF5Q13887 457 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms