RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 CD300LFQ8TDQ1 290 aa9.46□□□□□ -0.9
SF3B2-213ENST00000533421 SRSF12Q8WXF0 261 aaKnown RBP9.46□□□□□ -0.9
SF3B2-213ENST00000533421 S100ZQ8WXG8 99 aa9.46□□□□□ -0.9
SF3B2-213ENST00000533421 ELOVL1Q9BW60 279 aa9.46□□□□□ -0.9
SF3B2-213ENST00000533421 RANGRFQ9HD47 186 aaPredicted RBP9.46□□□□□ -0.9
SF3B2-213ENST00000533421 COA4Q9NYJ1 87 aa9.46□□□□□ -0.9
SF3B2-213ENST00000533421 COMMD9Q9P000 198 aa9.46□□□□□ -0.9
SF3B2-213ENST00000533421 CRYM-AS1A6NIL9 109 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 K7EIL1 84 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 IL6RP08887 468 aaPredicted RBP9.45□□□□□ -0.9
SF3B2-213ENST00000533421 HLA-GP17693 338 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 ECI1P42126 302 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
SF3B2-213ENST00000533421 RPL8P62917 257 aaKnown RBP9.45□□□□□ -0.9
SF3B2-213ENST00000533421 SUPT4H1P63272 117 aaKnown RBP9.45□□□□□ -0.9
SF3B2-213ENST00000533421 IFITM3Q01628 133 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 TATDN3Q17R31 274 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 SPINK9Q5DT21 86 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 DCUN1D4Q92564 292 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 SEC22AQ96IW7 307 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 HINT2Q9BX68 163 aa9.45□□□□□ -0.9
SF3B2-213ENST00000533421 WI2-2373I1.2A0A1W2PRP0 233 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 FAM223BA6NKX1 122 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 TEX22C9J3V5 150 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 LYRM1O43325 122 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 SAP30O75446 220 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 RBMXL2O75526 392 aaKnown RBP9.44□□□□□ -0.9
SF3B2-213ENST00000533421 DHFRP00374 187 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 IGHV3-11P01762 117 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 AREGP15514 252 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 CD69Q07108 199 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 SURF2Q15527 256 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-213ENST00000533421 POU2AF1Q16633 256 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 FAM223AQ8IWN6 122 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 OR10W1Q8NGF6 305 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 OR4A5Q8NH83 315 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 GLYATL2Q8WU03 294 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 OR4C12Q96R67 309 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 CCDC32Q9BV29 185 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 WDR12Q9GZL7 423 aaKnown RBP9.44□□□□□ -0.9
SF3B2-213ENST00000533421 ALX4Q9H161 411 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-213ENST00000533421 BET1LQ9NYM9 111 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
SF3B2-213ENST00000533421 ZNF256Q9Y2P7 627 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-213ENST00000533421 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 A0A087WW49 117 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 TEX50A0A1B0GTY4 177 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 UPK1BO75841 260 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 NDUFB6O95139 128 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 NXPH3O95157 252 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 LY86O95711 162 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 ANXA7P20073 488 aaKnown RBP9.43□□□□□ -0.9
SF3B2-213ENST00000533421 VAMP1P23763 118 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 UCP1P25874 307 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 AKR1C2P52895 323 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 TMEM187Q14656 261 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 TMEM268Q5VZI3 342 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 H2BFWTQ7Z2G1 175 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 SGPP2Q8IWX5 399 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 SELENOHQ8IZQ5 122 aaKnown RBP9.43□□□□□ -0.9
SF3B2-213ENST00000533421 RNASE11Q8TAA1 199 aaKnown RBP9.43□□□□□ -0.9
SF3B2-213ENST00000533421 DLX4Q92988 240 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-213ENST00000533421 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
SF3B2-213ENST00000533421 TMEM222Q9H0R3 208 aa9.43□□□□□ -0.9
SF3B2-213ENST00000533421 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 NAP1L6A6NFF2 107 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 CENPXA8MT69 81 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 CYB5BO43169 146 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 SLURP1P55000 103 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 PPP1R1AQ13522 171 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 RBMS2Q15434 407 aaKnown RBP9.42□□□□□ -0.9
SF3B2-213ENST00000533421 C11orf87Q6NUJ2 197 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 ACSM6Q6P461 480 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
SF3B2-213ENST00000533421 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 OR51B2Q9Y5P1 312 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 S4R3C0 116 aa9.42□□□□□ -0.9
SF3B2-213ENST00000533421 C15orf61A6NNL5 157 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 SNAPC5O75971 98 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 FGF2P09038 288 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 UBE2MP61081 183 aaKnown RBP9.41□□□□□ -0.9
SF3B2-213ENST00000533421 ATP5G2Q06055 141 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 ANKRD55Q3KP44 614 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 ZNF343Q6P1L6 599 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 Q6ZRM9 215 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 LYZL2Q7Z4W2 148 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 TTC9CQ8N5M4 171 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 SLC35G3Q8N808 338 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 NECAP1Q8NC96 275 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 OR52B4Q8NGK2 314 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 SLC25A21Q9BQT8 299 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-213ENST00000533421 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
SF3B2-213ENST00000533421 A0A0B4J293 547 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 IGLC7A0M8Q6 106 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 ANKRD34BA5PLL1 514 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms