RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SCRIBQ14160 1630 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 RIMS1Q86UR5 1692 aaKnown RBP2.72□□□□□ -1.97
SKP1-209ENST00000522552 KIAA1671Q9BY89 1806 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 A0A087WUU8 490 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 IGHV1-3A0A0C4DH29 117 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 OVOS2A0A0J9YW53 1432 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 TRDV1A0A1B0GX56 115 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 K7ERS5 55 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 IGKV1-5P01602 117 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 SCTP09683 121 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 LINC00869P0C866 280 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 KDELR1P24390 212 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 FKBP2P26885 142 aaKnown RBP2.72□□□□□ -1.97
SKP1-209ENST00000522552 CRYBB3P26998 211 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 CXCL12P48061 93 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 RAB13P51153 203 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 ZNF80P51504 273 aaPredicted RBP2.72□□□□□ -1.97
SKP1-209ENST00000522552 GNB2P62879 340 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 C15orf32Q32M92 178 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 FAM104BQ5XKR9 115 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 OVOS2Q6IE36 1432 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 ZNF101Q8IZC7 436 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 OR8I2Q8N0Y5 310 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 ZFP62Q8NB50 900 aaPredicted RBP2.72□□□□□ -1.97
SKP1-209ENST00000522552 OR51T1Q8NGJ9 327 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 OR5C1Q8NGR4 320 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 TMEM203Q969S6 136 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 ISOC1Q96CN7 298 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 RBMXL1Q96E39 390 aaKnown RBP2.72□□□□□ -1.97
SKP1-209ENST00000522552 GPX7Q96SL4 187 aaPredicted RBP2.72□□□□□ -1.97
SKP1-209ENST00000522552 RTL8AQ9BWD3 113 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 C1QTNF6Q9BXI9 259 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 AICDAQ9GZX7 198 aa2.72□□□□□ -1.97
SKP1-209ENST00000522552 ZNF73O43830 326 aaPredicted RBP2.71□□□□□ -1.98
SKP1-209ENST00000522552 OR2H2O95918 312 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 IFNGP01579 166 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 IL1RNP18510 177 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 EVI2AP22794 236 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BOP23527 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 ATP6V0CP27449 155 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BBP33778 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BDP58876 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BCP62807 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 RPL30P62888 115 aaKnown RBP2.71□□□□□ -1.98
SKP1-209ENST00000522552 IGLV3-21P80748 117 aaPredicted RBP2.71□□□□□ -1.98
SKP1-209ENST00000522552 NEDD8Q15843 81 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST2H2BEQ16778 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 RTL8BQ17RB0 113 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 LGALS9BQ3B8N2 356 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.71□□□□□ -1.98
SKP1-209ENST00000522552 LGALS9CQ6DKI2 356 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 SLC25A34Q6PIV7 304 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 C4orf22Q6V702 233 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 LCA10Q71F78 164 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 SSX8Q7RTT4 187 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 LHFPL1Q86WI0 220 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 SLC30A7Q8NEW0 376 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BHQ93079 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 BORCS8Q96FH0 119 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BNQ99877 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 HIST1H2BMQ99879 126 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 NDFIP1Q9BT67 221 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 RNF122Q9H9V4 155 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 MYH11P35749 1972 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 NUP210Q8TEM1 1887 aaPredicted RBP2.71□□□□□ -1.98
SKP1-209ENST00000522552 LTBP1Q14766 1721 aa2.71□□□□□ -1.98
SKP1-209ENST00000522552 OVOS2A0A0G2JMS6 1433 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 A0A087WYN8 130 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 TRAV38-1A0A0B4J264 116 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 DHRS12A0PJE2 317 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 UBE2L6O14933 153 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 TRGC2P03986 189 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 ZNF25P17030 456 aaPredicted RBP2.7□□□□□ -1.98
SKP1-209ENST00000522552 INSL3P51460 131 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 CCL20P78556 96 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 HNRNPA0Q13151 305 aaKnown RBP2.7□□□□□ -1.98
SKP1-209ENST00000522552 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 CROCCP2Q86T23 111 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 TCTE3Q8IZS6 198 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 OR4C16Q8NGL9 310 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 LINC01560Q8TB33 94 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 SLC25A46Q96AG3 418 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 SLAMF6Q96DU3 332 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 ZC2HC1AQ96GY0 325 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 TEX37Q96LM6 180 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 SLC25A21Q9BQT8 299 aaPredicted RBP2.7□□□□□ -1.98
SKP1-209ENST00000522552 GABARAPL1Q9H0R8 117 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 LPAR5Q9H1C0 372 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 KLK5Q9Y337 293 aaPredicted RBP2.7□□□□□ -1.98
SKP1-209ENST00000522552 TMEM14AQ9Y6G1 99 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 RTL9Q8NET4 1388 aa2.7□□□□□ -1.98
SKP1-209ENST00000522552 TRAV5A0A0B4J249 113 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 A0A1B0GW54 56 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 A8MWP4 228 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 FAM25AB3EWG3 89 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 FAM25CB3EWG5 89 aa2.69□□□□□ -1.98
SKP1-209ENST00000522552 FAM25GB3EWG6 89 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms