RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GREB1LQ9C091 1923 aaPredicted RBP13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 H3BTX0 84 aa13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 TBX6O95947 436 aaPredicted RBP13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 DANCRP0C864 163 aa13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 EFNA4P52798 201 aa13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 C8orf46Q8TAG6 207 aa13.67□□□□□ -0.22
PCDHA3-201ENST00000522353 IGHV1-18A0A0C4DH31 117 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 NUDT3O95989 172 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 AMY1AP04745 511 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 CCL3L1P16619 93 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 CACNG8Q8WXS5 425 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 TRPM7Q96QT4 1865 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 KLK2P20151 261 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 ZNF385CQ66K41 422 aaPredicted RBP13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 PUSL1Q8N0Z8 303 aaKnown RBP13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 HIST1H2BAQ96A08 127 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 A0A1W2PRX2 142 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 PINLYPA6NC86 204 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 UCP1P25874 307 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 PLSCR4Q9NRQ2 329 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
PCDHA3-201ENST00000522353 IGHV3-49A0A0A0MS15 119 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 A0A1B0GTI1 187 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 PMCHL1Q16048 86 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 PGLYRP4Q96LB8 373 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 YPEL1O60688 119 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 MDKP21741 143 aaPredicted RBP13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 CLEC19AQ6UXS0 136 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 YPEL2Q96QA6 119 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 NPIPB7O75200 414 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 AGAP20933 346 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 ICAM4Q14773 271 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 C2orf68Q2NKX9 166 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 WDR82Q6UXN9 313 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 MSGN1A6NI15 193 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 IGHV3-23P01764 117 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 NBEAP1P0C6P0 100 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 GNLYP22749 145 aa13.65□□□□□ -0.22
PCDHA3-201ENST00000522353 LEPROTL1O95214 131 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 COX6CP09669 75 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 GCHFRP30047 84 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 TRGC2P03986 189 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 RAB37Q96AX2 223 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 TMEM70Q9BUB7 260 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 CD8AP01732 235 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 MRPL18Q9H0U6 180 aaKnown RBP13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 IGHV3-11P01762 117 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 RPLP1P05386 114 aaKnown RBP13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 CACNA1HO95180 2353 aa13.64□□□□□ -0.23
PCDHA3-201ENST00000522353 CACNA1DQ01668 2161 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 TMEM262E9PQX1 116 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 IL6RP08887 468 aaPredicted RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 TNFRSF14Q92956 283 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 NPFFO15130 113 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 PRSS8Q16651 343 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 C9JCJ5 164 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 CIRBPQ14011 172 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 SMIM12Q96EX1 92 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 WNT10AQ9GZT5 417 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 GEMIN7Q9H840 131 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 MTCL1Q9Y4B5 1905 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 TRBV9A0A0B4J1U6 114 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 ZCCHC24Q8N2G6 241 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 PTPRFP10586 1907 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 RRHO14718 337 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 GPX4P36969 197 aaPredicted RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 GTF3AQ92664 365 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 S4R3C0 116 aa13.63□□□□□ -0.23
PCDHA3-201ENST00000522353 PROB1E7EW31 1015 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 FOXF2Q12947 444 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 DUX3Q96PT4 197 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 PARLQ9H300 379 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 LYNX1G3V0Z9 82 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 LYNX1P0DP58 116 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 ASIPP42127 132 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 TEX45Q8NA69 505 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 DOCK6Q96HP0 2047 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 PPP1R17O96001 155 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 OR1P1Q8NH06 330 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 WNT2P09544 360 aa13.62□□□□□ -0.23
PCDHA3-201ENST00000522353 ROS1P08922 2347 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 TRAV40A0A0B4J280 105 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 LINC00271P0C7V0 271 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 RPRMQ9NS64 109 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 IGHV3-66A0A0C4DH42 116 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 H3BVH4 76 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 HEATR5BQ9P2D3 2071 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 B4DSR2 109 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms