RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 FAM219AQ8IW50 185 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 DUSP18Q8NEJ0 188 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 OR5T1Q8NG75 326 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 LSM10Q969L4 123 aaKnown RBP14.11□□□□□ -0.15
VEGFA-222ENST00000520948 COMMD5Q9GZQ3 224 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 C20orf85Q9H1P6 137 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 NDUFA4L2Q9NRX3 87 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 FKBP11Q9NYL4 201 aa14.11□□□□□ -0.15
VEGFA-222ENST00000520948 A0A0B4J2A0 478 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 FAM240BA0A1B0GVZ2 78 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 C9orf170A2RU37 121 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 OR4E1P0C645 316 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 IGLL1P15814 213 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 AKR1C2P52895 323 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 KLK9Q2XQG4 91 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 AARDQ4LEZ3 155 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 CXorf66Q5JRM2 361 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-222ENST00000520948 ZNF429Q86V71 674 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 LGI3Q8N145 548 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 OR1L8Q8NGR8 309 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 GPR146Q96CH1 333 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 FYTTD1Q96QD9 318 aaKnown RBP14.1□□□□□ -0.15
VEGFA-222ENST00000520948 PHB2Q99623 299 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 SRSF8Q9BRL6 282 aaKnown RBP14.1□□□□□ -0.15
VEGFA-222ENST00000520948 SHPKQ9UHJ6 478 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 KLK9Q9UKQ9 250 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 ZNF257Q9Y2Q1 563 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 OR51B2Q9Y5P1 312 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 DNAH3Q8TD57 4116 aa14.1□□□□□ -0.15
VEGFA-222ENST00000520948 IGLC7A0M8Q6 106 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 H3BUA1 57 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 CRYGCP07315 174 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 TRAPPC2P0DI81 140 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 TRAPPC2BP0DI82 140 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 APELAP0DMC3 54 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 ANXA7P20073 488 aaKnown RBP14.09□□□□□ -0.15
VEGFA-222ENST00000520948 CD33P20138 364 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 VAMP1P23763 118 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 CDX1P47902 265 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-222ENST00000520948 RPL23AP62750 156 aaKnown RBP14.09□□□□□ -0.15
VEGFA-222ENST00000520948 SRPXP78539 464 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 LYZL2Q7Z4W2 148 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 SLC35G3Q8N808 338 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 ZNF491Q8N8L2 437 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 OR4A16Q8NH70 328 aa14.09□□□□□ -0.15
VEGFA-222ENST00000520948 RRNAD1Q96FB5 475 aaKnown RBP14.09□□□□□ -0.15
VEGFA-222ENST00000520948 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
VEGFA-222ENST00000520948 NPIPB5A8MRT5 1133 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 PF4V1P10720 104 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 HSPE1P61604 102 aaKnown RBP14.08□□□□□ -0.16
VEGFA-222ENST00000520948 NMSQ5H8A3 153 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 THOC7Q6I9Y2 204 aaKnown RBP14.08□□□□□ -0.16
VEGFA-222ENST00000520948 TMEM65Q6PI78 240 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 LYG2Q86SG7 212 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 OR10W1Q8NGF6 305 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 CASTOR1Q8WTX7 329 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 SLA2Q9H6Q3 261 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 NUDT15Q9NV35 164 aa14.08□□□□□ -0.16
VEGFA-222ENST00000520948 TRAV6A0A075B6T7 132 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 TRBV9A0A0B4J1U6 114 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 DUXBA0A1W2PPF3 345 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 H2AFB2P0C5Z0 115 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 AREGP15514 252 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 CTRB1P17538 263 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 PSMB6P28072 239 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 DHRS2Q13268 280 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 CTRB2Q6GPI1 263 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 C18orf65Q6ZTR6 163 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 NRARPQ7Z6K4 114 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 UBE2E2Q96LR5 201 aa14.07□□□□□ -0.16
VEGFA-222ENST00000520948 PIGBOS1A0A0B4J2F0 54 aa14.06□□□□□ -0.16
VEGFA-222ENST00000520948 RBMXL2O75526 392 aaKnown RBP14.06□□□□□ -0.16
VEGFA-222ENST00000520948 DUS4LO95620 317 aaKnown RBP14.06□□□□□ -0.16
VEGFA-222ENST00000520948 HLA-AP01891 365 aaKnown RBP14.06□□□□□ -0.16
VEGFA-222ENST00000520948 DEFA1P59665 94 aa14.06□□□□□ -0.16
VEGFA-222ENST00000520948 DEFA3P59666 94 aa14.06□□□□□ -0.16
VEGFA-222ENST00000520948 WT1-ASQ06250 92 aa14.06□□□□□ -0.16
VEGFA-222ENST00000520948 HSD17B13Q7Z5P4 300 aaPredicted RBP14.06□□□□□ -0.16
VEGFA-222ENST00000520948 MS4A10Q96PG2 267 aa14.06□□□□□ -0.16
VEGFA-222ENST00000520948 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.06□□□□□ -0.16
VEGFA-222ENST00000520948 COA4Q9NYJ1 87 aa14.06□□□□□ -0.16
VEGFA-222ENST00000520948 ST8SIA3O43173 380 aa14.05□□□□□ -0.16
VEGFA-222ENST00000520948 PRCDQ00LT1 54 aa14.05□□□□□ -0.16
VEGFA-222ENST00000520948 C11orf87Q6NUJ2 197 aa14.05□□□□□ -0.16
VEGFA-222ENST00000520948 OR52E5Q8NH55 327 aa14.05□□□□□ -0.16
VEGFA-222ENST00000520948 RNASE11Q8TAA1 199 aaKnown RBP14.05□□□□□ -0.16
VEGFA-222ENST00000520948 FANCD2OSQ96PS1 177 aa14.05□□□□□ -0.16
VEGFA-222ENST00000520948 INS-IGF2F8WCM5 200 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 I3L521 148 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 K7EIL1 84 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 TRGV3P03979 118 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 RUNX1Q01196 453 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 C4orf46Q504U0 113 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 C19orf35Q6ZS72 473 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 WFDC9Q8NEX5 89 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 OR52B4Q8NGK2 314 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 ENKURQ8TC29 256 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 MITD1Q8WV92 249 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 GNB4Q9HAV0 340 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms